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The map label for this gene is clpS [H]

Identifier: 110634479

GI number: 110634479

Start: 2284694

End: 2284999

Strand: Direct

Name: clpS [H]

Synonym: Meso_2130

Alternate gene names: 110634479

Gene position: 2284694-2284999 (Clockwise)

Preceding gene: 110634478

Following gene: 110634483

Centisome position: 51.78

GC content: 58.17

Gene sequence:

>306_bases
ATGAGCGACATCGTCCTGAAGCCACGCACCAAGACGAAGCCGAAAGTCGACAAGCCGAAGCTTCACAAGGTGATCCTCGT
CAACGACGATTTTACGCCCCGCGAATTCGTCGTGCGGGTGCTGAAGGCGGAATTCCGGCTGAATCAGGATCAGGCATACC
GAGTCATGATCACCGCACACCGGCGCGGAACCTGCGTCGTCGCCGTTTTCCCCAAGGATATTGCTGAGACGAAAGCAACG
CGTGCGACGGATGCAGGCCGGAAAGCGGGTTATCCGCTGCTCTTTACCACCGAGCCGGAGGAATGA

Upstream 100 bases:

>100_bases
GCCTGGACTTTAGGCCGGACGTCGTGTTCAAATCCAAGAACCGCAGAGGGTAAATTTCAGCGGCAGTTAGCGTGATCCAT
CACTCCGCACGGAGTGCTTC

Downstream 100 bases:

>100_bases
CCGCGCCCGGTGATACATTTAGAAATAAATTGGGATCTTTTGAAATTTTTGAGGAAACATCCGAATTTTTTGATATGAGA
TTTTGTGAGGGTGCCCGCTG

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAHRRGTCVVAVFPKDIAETKAT
RATDAGRKAGYPLLFTTEPEE

Sequences:

>Translated_101_residues
MSDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAHRRGTCVVAVFPKDIAETKAT
RATDAGRKAGYPLLFTTEPEE
>Mature_100_residues
SDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAHRRGTCVVAVFPKDIAETKATR
ATDAGRKAGYPLLFTTEPEE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=92, Percent_Identity=40.2173913043478, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11525; Mature: 11393

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAH
CCCCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC
RRGTCVVAVFPKDIAETKATRATDAGRKAGYPLLFTTEPEE
CCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SDIVLKPRTKTKPKVDKPKLHKVILVNDDFTPREFVVRVLKAEFRLNQDQAYRVMITAH
CCCEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC
RRGTCVVAVFPKDIAETKATRATDAGRKAGYPLLFTTEPEE
CCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]