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The map label for this gene is yciA [C]

Identifier: 110634474

GI number: 110634474

Start: 2280444

End: 2280836

Strand: Reverse

Name: yciA [C]

Synonym: Meso_2125

Alternate gene names: 110634474

Gene position: 2280836-2280444 (Counterclockwise)

Preceding gene: 110634475

Following gene: 110634472

Centisome position: 51.69

GC content: 63.61

Gene sequence:

>393_bases
ATGGCTGAAACCTCTGCCGCCCCGCGGGGCGAGCTTACGATTCGCACCCAGGCGATGCCCGGAGATGCCAATGCCGCCGG
AGACATTTTCGGCGGCTGGGTGATGTCGCAGATGGATCTGGCAAGCGGCATTAGGGCAGCGGAACGGGCGCGCGGGCGCG
TCGTGACGGCTGCCGTCAGGGAAATGCACTTTCGCAAGCCGGTTCAGGTCGGTGATACGCTTTGTGTCTATACCCAGGTG
ACGAATGTTGGCCGCACCTCTATCACGCTAAAGGTGGAGGCATGGGCACAGCGTTACCTGTCCGACGTCATGGACCTGGT
CACCATGGCGGACTTCGTCATGGTCGCGCTTGACGGGACCGGCCGGCCGACACCGGTGCCGCCCGAGTTCTGA

Upstream 100 bases:

>100_bases
TGACAGCGGAATGTGATTTTACTGCTTCAGAAATTGAGTCAGGATTTTGAGGGATTGATTCCGAATCTTCGCGCAAACTA
TTGAAAACAAGGAAATTCTT

Downstream 100 bases:

>100_bases
TCCCGTATCAGCCGTTATTGCGATCGAAGCGGGTCCGAGCTTCCTGGATGCGATAGCGATTTTCGCTTACCCATTCCGCA
AGCGCCCGGATGGGGATCAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAETSAAPRGELTIRTQAMPGDANAAGDIFGGWVMSQMDLASGIRAAERARGRVVTAAVREMHFRKPVQVGDTLCVYTQV
TNVGRTSITLKVEAWAQRYLSDVMDLVTMADFVMVALDGTGRPTPVPPEF

Sequences:

>Translated_130_residues
MAETSAAPRGELTIRTQAMPGDANAAGDIFGGWVMSQMDLASGIRAAERARGRVVTAAVREMHFRKPVQVGDTLCVYTQV
TNVGRTSITLKVEAWAQRYLSDVMDLVTMADFVMVALDGTGRPTPVPPEF
>Mature_129_residues
AETSAAPRGELTIRTQAMPGDANAAGDIFGGWVMSQMDLASGIRAAERARGRVVTAAVREMHFRKPVQVGDTLCVYTQVT
NVGRTSITLKVEAWAQRYLSDVMDLVTMADFVMVALDGTGRPTPVPPEF

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=132, Percent_Identity=45.4545454545455, Blast_Score=119, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 14030; Mature: 13899

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETSAAPRGELTIRTQAMPGDANAAGDIFGGWVMSQMDLASGIRAAERARGRVVTAAVR
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EMHFRKPVQVGDTLCVYTQVTNVGRTSITLKVEAWAQRYLSDVMDLVTMADFVMVALDGT
HHHHCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GRPTPVPPEF
CCCCCCCCCC
>Mature Secondary Structure 
AETSAAPRGELTIRTQAMPGDANAAGDIFGGWVMSQMDLASGIRAAERARGRVVTAAVR
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EMHFRKPVQVGDTLCVYTQVTNVGRTSITLKVEAWAQRYLSDVMDLVTMADFVMVALDGT
HHHHCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GRPTPVPPEF
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]