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The map label for this gene is yfeA [H]

Identifier: 110634455

GI number: 110634455

Start: 2261147

End: 2262019

Strand: Reverse

Name: yfeA [H]

Synonym: Meso_2106

Alternate gene names: 110634455

Gene position: 2262019-2261147 (Counterclockwise)

Preceding gene: 110634457

Following gene: 110634452

Centisome position: 51.26

GC content: 60.37

Gene sequence:

>873_bases
ATGACTGAAGCGGAAGACCTTGCCCGGCGTATTGATGAGGCCATCCTGGTCGATGAAATCGGGGTCGAGACCGGACGCTA
TGGCCCTTATCATCTCAAGACGCTCTACCAACCCATATTTGCGAACACTTCGCAGGGTCTCATTCCGTGTGGGGTGGAAG
GCCTGGCCGGCCCTCAGAGGGAGGGACAACCGGTCGCCACCCGCGCCTTTTTCGCCGAAGTGAGCGCCGCGGAAGACAGG
CTCTTCGTCGAAAGCCTTTGTCATACGCTGCATCTCAGGAATTATCCCAATATCGGCGTGGACGGTTTGATGCTTTTCAT
CAAATATTATGCGAGCGCCGATCTCGGCCTGGATGCCGCCAAGCGGCAGGTCGCCGAAATGGTCCGTTTTCTGGATGAAA
TTTCGGTCGATCCCGCGTTGCTCGTATGCGAGATCGCCGAGACCGCCGATGAGGGACTGATGACGCAGATCGCGACGGAG
TTGCGTCAGCGCGGTATCCGCATAGCCGTGGACGATTTCGGCGTCGGCCGCTCCACTCTTTCGCGGGTAAGGCTGCTTGA
TCCGGAAGTAGTCAAGGTCGACGGCGGATGGTTCCGGCGCATCGCAGATGTCGCCATGGCTGCGAAGCTTCTCAACTCCC
TGGTGGATGCCTTGCAGCGGGAGGGCCGTCAGGTGCTGATCCAGGGTATCGAGACGGCCGCCCAATTGCGGGTGGCAATC
CAGACAGGCGCCGATTTCGTCCAGGGATACCTGCTCGGGCGTCCGAAGCTTGCCGGCGCCATCTTCGATACCAGCCCGTT
GCATATCGAAGGCCTGTTTGCCTCCGGCGACAGGGTGGTGCCGTTGTTCGCGGCGCCTGGCCGCTCAGTCTGA

Upstream 100 bases:

>100_bases
GTCAGTGATTCCAAGGCGCAACGGCGCACCGCGCGAAAGCTCTGATTTGCATGATCGGTCTTTAGCTCGGGATGCGTGCT
GCGAAGCAAATGACGGACGC

Downstream 100 bases:

>100_bases
GCGGCTCATTTCCAGATCCAAGCCCTCCGATTTCGGGCATCCATTGCCCGATCCTCGCCCACGGCAACAGGCAGCCTCAA
TGGCTAATGCCTGCGGCAGT

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTEAEDLARRIDEAILVDEIGVETGRYGPYHLKTLYQPIFANTSQGLIPCGVEGLAGPQREGQPVATRAFFAEVSAAEDR
LFVESLCHTLHLRNYPNIGVDGLMLFIKYYASADLGLDAAKRQVAEMVRFLDEISVDPALLVCEIAETADEGLMTQIATE
LRQRGIRIAVDDFGVGRSTLSRVRLLDPEVVKVDGGWFRRIADVAMAAKLLNSLVDALQREGRQVLIQGIETAAQLRVAI
QTGADFVQGYLLGRPKLAGAIFDTSPLHIEGLFASGDRVVPLFAAPGRSV

Sequences:

>Translated_290_residues
MTEAEDLARRIDEAILVDEIGVETGRYGPYHLKTLYQPIFANTSQGLIPCGVEGLAGPQREGQPVATRAFFAEVSAAEDR
LFVESLCHTLHLRNYPNIGVDGLMLFIKYYASADLGLDAAKRQVAEMVRFLDEISVDPALLVCEIAETADEGLMTQIATE
LRQRGIRIAVDDFGVGRSTLSRVRLLDPEVVKVDGGWFRRIADVAMAAKLLNSLVDALQREGRQVLIQGIETAAQLRVAI
QTGADFVQGYLLGRPKLAGAIFDTSPLHIEGLFASGDRVVPLFAAPGRSV
>Mature_289_residues
TEAEDLARRIDEAILVDEIGVETGRYGPYHLKTLYQPIFANTSQGLIPCGVEGLAGPQREGQPVATRAFFAEVSAAEDRL
FVESLCHTLHLRNYPNIGVDGLMLFIKYYASADLGLDAAKRQVAEMVRFLDEISVDPALLVCEIAETADEGLMTQIATEL
RQRGIRIAVDDFGVGRSTLSRVRLLDPEVVKVDGGWFRRIADVAMAAKLLNSLVDALQREGRQVLIQGIETAAQLRVAIQ
TGADFVQGYLLGRPKLAGAIFDTSPLHIEGLFASGDRVVPLFAAPGRSV

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082096, Length=140, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790496, Length=230, Percent_Identity=23.9130434782609, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788502, Length=133, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI87081980, Length=100, Percent_Identity=31, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788849, Length=134, Percent_Identity=23.8805970149254, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR007895 [H]

Pfam domain/function: PF00563 EAL; PF05231 MASE1 [H]

EC number: NA

Molecular weight: Translated: 31580; Mature: 31448

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAEDLARRIDEAILVDEIGVETGRYGPYHLKTLYQPIFANTSQGLIPCGVEGLAGPQR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EGQPVATRAFFAEVSAAEDRLFVESLCHTLHLRNYPNIGVDGLMLFIKYYASADLGLDAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
KRQVAEMVRFLDEISVDPALLVCEIAETADEGLMTQIATELRQRGIRIAVDDFGVGRSTL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
SRVRLLDPEVVKVDGGWFRRIADVAMAAKLLNSLVDALQREGRQVLIQGIETAAQLRVAI
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTGADFVQGYLLGRPKLAGAIFDTSPLHIEGLFASGDRVVPLFAAPGRSV
HHCHHHHHHHHCCCCHHCCEEECCCCCEEEEEEECCCEEEEEECCCCCCC
>Mature Secondary Structure 
TEAEDLARRIDEAILVDEIGVETGRYGPYHLKTLYQPIFANTSQGLIPCGVEGLAGPQR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
EGQPVATRAFFAEVSAAEDRLFVESLCHTLHLRNYPNIGVDGLMLFIKYYASADLGLDAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
KRQVAEMVRFLDEISVDPALLVCEIAETADEGLMTQIATELRQRGIRIAVDDFGVGRSTL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
SRVRLLDPEVVKVDGGWFRRIADVAMAAKLLNSLVDALQREGRQVLIQGIETAAQLRVAI
HHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTGADFVQGYLLGRPKLAGAIFDTSPLHIEGLFASGDRVVPLFAAPGRSV
HHCHHHHHHHHCCCCHHCCEEECCCCCEEEEEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2201776 [H]