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The map label for this gene is yhcV [H]

Identifier: 110634385

GI number: 110634385

Start: 2187957

End: 2188388

Strand: Reverse

Name: yhcV [H]

Synonym: Meso_2035

Alternate gene names: 110634385

Gene position: 2188388-2187957 (Counterclockwise)

Preceding gene: 110634388

Following gene: 110634383

Centisome position: 49.6

GC content: 63.43

Gene sequence:

>432_bases
ATGCAGATCCAGGAAATCATGACAAGGTCGGTCGATCTTATCGACCCCAACGCCACCATCCGCGAAGCCGCCCGCAAAAT
GCGCGAGGACAATGTCGGAGCCCTGCCGGTGGGCGAAAACGACCGGCTGATCGGCATGGTAACCGACCGCGACATCACGG
TTCGCGCGGTGGCCGAGGAACGGTCTGCCGGCAATACCAGTGTGCGGGAGGTTATGTCGGAAAGGGTGGCCTACTGCTAT
GAGGATGACGATGCGGAACGCGCAGCCGCAGTCATGGCGCGGCATCAGGTCCGGCGGCTGCCGGTGATCAATCGCGATAA
GCGGCTCGTTGGCATCGTGGCGCTCGCAGATCTCGTCCGCGGGGATGGCCTGGCCGCCGGACACGCGTTGGAAGGCATAT
CGGAGCCGAGCGATCAGCCGAGGCTGATGTAG

Upstream 100 bases:

>100_bases
AGGCACGGAAAGGGCGATTTCGCCCCCCAACGCCATGAAACATCAAAGCCCTACCGTCGTTTGTGTTGGAAGACAACTGG
TTGAGGCAGGAGGACAGGTC

Downstream 100 bases:

>100_bases
AACTGATAGCGGGCGCTTTCAGGTTCGCGACAGCACCTTTTCAGCCCAGTTCGCGAAATCGCGCATGATGAGATTTCGAT
TCAGCTCGTTGAGAGGTTCG

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPVGENDRLIGMVTDRDITVRAVAEERSAGNTSVREVMSERVAYCY
EDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVRGDGLAAGHALEGISEPSDQPRLM

Sequences:

>Translated_143_residues
MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPVGENDRLIGMVTDRDITVRAVAEERSAGNTSVREVMSERVAYCY
EDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVRGDGLAAGHALEGISEPSDQPRLM
>Mature_143_residues
MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPVGENDRLIGMVTDRDITVRAVAEERSAGNTSVREVMSERVAYCY
EDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVRGDGLAAGHALEGISEPSDQPRLM

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15780; Mature: 15780

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPVGENDRLIGMVTDRDITVRAVAEE
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECHH
RSAGNTSVREVMSERVAYCYEDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVR
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GDGLAAGHALEGISEPSDQPRLM
CCCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPVGENDRLIGMVTDRDITVRAVAEE
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECHH
RSAGNTSVREVMSERVAYCYEDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVR
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
GDGLAAGHALEGISEPSDQPRLM
CCCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]