| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634384
Identifier: 110634384
GI number: 110634384
Start: 2187003
End: 2187938
Strand: Direct
Name: 110634384
Synonym: Meso_2034
Alternate gene names: NA
Gene position: 2187003-2187938 (Clockwise)
Preceding gene: 110634380
Following gene: 110634386
Centisome position: 49.56
GC content: 63.89
Gene sequence:
>936_bases GTGGCATTCAAGACCGAGACGACATTGAACAGCCCGACCGGGGCAACGCTCCGGCTTTACATGCAAGGCGCCGAAGGCAG TCCGCGCGCTGTCGTCCAGATCAATCACGGATTGGCCGAGCATGCCGGCCGCTATGGCCGCTTCGCCGCATTTCTTGCAG GGCACGGCTTCCATACTTACGCGCATGACCACCGAGGCCACGGCCATACTGAGGCGCCGCGGGCGGCGCTCGGCTCTTTC GGGCCGGAGCCCGCGGCGGATAACGTGCTGGCGGACGTTCTGGCCGTCCACGACCATATCGCCGAGAAGCATCCGGGCTT GCCGGTCATCCTCTTCGGCCATTCCATGGGGGCGATGATCGCGCTTGCCTTTCTGGCACGCCATCCGCAGCGCGTGCGCG CGGCAGCACTCTGGAACATGCCGCTCGCGACGCGGATCGAAGCGCAGGCGGCAAAGGCCTTCCTTGCCTGGGAGCGCTTC CGGCTCGGCTCGGACGTTCCCTCGCGGATCATGCCGCGCCTCACCTTCCGCGCCTGGGCGAAGGCTGTCCCGGATGCGCG AACGCCCTTCGACTGGCTCTCGCAAGACACAAGCGAAGTGGACCGCTATATCGCCGATCCGCTCTGCGGCTGGGATGCGA CGGTGGGCTTATGGCGCGCTGTCTTCAATTTCAATCTGATAGCGGTGAACGACCGTGCGCTCCGGGCGATCCCGAAGACG CTTCCGATCCAGCTTACGGGGGGCGGCGCGGACCCTTCGACAGCGGGAGGCATTGCGCTCAGAAGGCTTGAAAAGCGCCT TCGCAGGAACGGCTTTTCAGACCTGGAAACAACGATTTACCCGGAAAGCCGGCACGAACCTCTCAACGAGCTGAATCGAA ATCTCATCATGCGCGATTTCGCGAACTGGGCTGAAAAGGTGCTGTCGCGAACCTGA
Upstream 100 bases:
>100_bases CGAACAGGCGCTCGGGGCCACATCTTTCCCTACTTGCTATTCACTACCCCCTGTTTGCTTTTTCGCCGCGTATGTAGGCC AAAGACGCCCGGGGAGCAAC
Downstream 100 bases:
>100_bases AAGCGCCCGCTATCAGTTCTACATCAGCCTCGGCTGATCGCTCGGCTCCGATATGCCTTCCAACGCGTGTCCGGCGGCCA GGCCATCCCCGCGGACGAGA
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Acylglycerol Lipase; Lipase; Lysophospholipase Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase; Carboxylic Ester Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAFKTETTLNSPTGATLRLYMQGAEGSPRAVVQINHGLAEHAGRYGRFAAFLAGHGFHTYAHDHRGHGHTEAPRAALGSF GPEPAADNVLADVLAVHDHIAEKHPGLPVILFGHSMGAMIALAFLARHPQRVRAAALWNMPLATRIEAQAAKAFLAWERF RLGSDVPSRIMPRLTFRAWAKAVPDARTPFDWLSQDTSEVDRYIADPLCGWDATVGLWRAVFNFNLIAVNDRALRAIPKT LPIQLTGGGADPSTAGGIALRRLEKRLRRNGFSDLETTIYPESRHEPLNELNRNLIMRDFANWAEKVLSRT
Sequences:
>Translated_311_residues MAFKTETTLNSPTGATLRLYMQGAEGSPRAVVQINHGLAEHAGRYGRFAAFLAGHGFHTYAHDHRGHGHTEAPRAALGSF GPEPAADNVLADVLAVHDHIAEKHPGLPVILFGHSMGAMIALAFLARHPQRVRAAALWNMPLATRIEAQAAKAFLAWERF RLGSDVPSRIMPRLTFRAWAKAVPDARTPFDWLSQDTSEVDRYIADPLCGWDATVGLWRAVFNFNLIAVNDRALRAIPKT LPIQLTGGGADPSTAGGIALRRLEKRLRRNGFSDLETTIYPESRHEPLNELNRNLIMRDFANWAEKVLSRT >Mature_310_residues AFKTETTLNSPTGATLRLYMQGAEGSPRAVVQINHGLAEHAGRYGRFAAFLAGHGFHTYAHDHRGHGHTEAPRAALGSFG PEPAADNVLADVLAVHDHIAEKHPGLPVILFGHSMGAMIALAFLARHPQRVRAAALWNMPLATRIEAQAAKAFLAWERFR LGSDVPSRIMPRLTFRAWAKAVPDARTPFDWLSQDTSEVDRYIADPLCGWDATVGLWRAVFNFNLIAVNDRALRAIPKTL PIQLTGGGADPSTAGGIALRRLEKRLRRNGFSDLETTIYPESRHEPLNELNRNLIMRDFANWAEKVLSRT
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI6005786, Length=286, Percent_Identity=30.0699300699301, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI51242953, Length=286, Percent_Identity=30.0699300699301, Blast_Score=105, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34344; Mature: 34212
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKTETTLNSPTGATLRLYMQGAEGSPRAVVQINHGLAEHAGRYGRFAAFLAGHGFHTY CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHCCHHHHHHHHHHCCCCHHC AHDHRGHGHTEAPRAALGSFGPEPAADNVLADVLAVHDHIAEKHPGLPVILFGHSMGAMI CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH ALAFLARHPQRVRAAALWNMPLATRIEAQAAKAFLAWERFRLGSDVPSRIMPRLTFRAWA HHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KAVPDARTPFDWLSQDTSEVDRYIADPLCGWDATVGLWRAVFNFNLIAVNDRALRAIPKT HHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCHHHHHCCCC LPIQLTGGGADPSTAGGIALRRLEKRLRRNGFSDLETTIYPESRHEPLNELNRNLIMRDF CCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCHHHHHHHHHHHHH ANWAEKVLSRT HHHHHHHHHCC >Mature Secondary Structure AFKTETTLNSPTGATLRLYMQGAEGSPRAVVQINHGLAEHAGRYGRFAAFLAGHGFHTY CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCHHHHCCHHHHHHHHHHCCCCHHC AHDHRGHGHTEAPRAALGSFGPEPAADNVLADVLAVHDHIAEKHPGLPVILFGHSMGAMI CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH ALAFLARHPQRVRAAALWNMPLATRIEAQAAKAFLAWERFRLGSDVPSRIMPRLTFRAWA HHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KAVPDARTPFDWLSQDTSEVDRYIADPLCGWDATVGLWRAVFNFNLIAVNDRALRAIPKT HHCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCHHHHHCCCC LPIQLTGGGADPSTAGGIALRRLEKRLRRNGFSDLETTIYPESRHEPLNELNRNLIMRDF CCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCHHHHHHHHHHHHH ANWAEKVLSRT HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA