| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634374
Identifier: 110634374
GI number: 110634374
Start: 2175635
End: 2177041
Strand: Reverse
Name: 110634374
Synonym: Meso_2024
Alternate gene names: NA
Gene position: 2177041-2175635 (Counterclockwise)
Preceding gene: 110634377
Following gene: 110634373
Centisome position: 49.34
GC content: 63.11
Gene sequence:
>1407_bases ATGCGGAGAACTCTTTCCATCACCAAGTGGGTTTTGAGCCTCGTCATCCTGGTTGCGGCAGTGGCAGCCCTTTGGTTCTG GTACACCCCGCCCGAACTGATCCGCGTCGGCTCCAATTATGCGGCCAAGATCATCTGTTCCAACGTTTTCCTTGCCAATC GCGATCCTTCGGCGGTGCTGGACGAAGATGTGCAGGCGCCGGGCAACCCGCTTCTCAGGCTGATGCGCGTTGAGGTCGAT GCCGCCCATGCTACGGTGCGCACCGGCCTTTTCGGATCGATCGGCGATGGACTTGCTCTTTTTCGCGGGGCAACAGGATG CGCCGCCGTGCCGGACGGGGATCTGGCGGCAGCGCGCGGCATCGTCGCGGATCTGCCGACCGCCACGGGCAACGTGGAAC TTTGGCCGGCGGGAGACCGTATCGAAGTCTCGGCCAACCCTGCCATGGCAGAGGTTCTCGACGATCCAGGCATGACCGGG CCGGGCATGCGCGCCATCGTGATCGTGCGCGACGGGCGGATCATCGGCGAGCGGTTCGGGCCGGGTGTGGAGGGATACGA CCAGCCGCTTATCGGCTGGTCCATGACGAAAACGGTGAACGCGGCCATTGTCGGGACGCTGGCCGGGGCGGGAAGACTTT CGGTCGAGGAGGGGAACCTTCTTCCCCAATGGGCGGGTGACAGCCGGGCAGAGATAACGCTGGCTCAATTGCTCGGCATG GAGAGCGGGCTTGCCTTCAACGAGAATTACGGAAACGTCAGCGACGTCACGCGCATGCTCTTCCTGGAGCCGGACATGGC GGCCTTCGCGGCCAACCAGCCGCTGCTTTACCGGCCAGGAACGCATTTTTCCTATTCGAGCGGCGCCAGCGTGATTGTCT CTCGCATATGGCAGAACGCCTTTGAAAATCCGGAGGAGGCGTTCGCATGGCCGCGTGAGGCGCTGTTCGAACCCATCGGG ATGAACACGGCCGTTTTCGAGACCGATGCGCGGGGCACCTTCGTCGGTTCCTCCTATCTCTATGCTTCCGCACGCGACTG GGCGCGCTTCGGCCAGTTGCTTCTACAGGACGGGGTCTGGAACGGCCGGCGCATCCTGCCGCAAGGCTGGGTGGAATGGA TGGCCAGGCCGACGGAGGCTTCCGACGGCGATTATGGCAGGGGCGTCTGGCTGCACGGACCGCGCGTCGGGTTTTCACCC AGCCCAGACCCCGATGCCGGGTTCGACCTGCCGCAGGATACCTATTGGCTGATCGGCCATGACGGTCAGGTGATTGCGAT CATTCCTTCACGGCGGCTTGTTGTCGTGCGCATGGGTCTGACACCCTCAAAGCTCGCCTATAAGCCTCAGGCGCTGGTGG AGGCAATGGTGAAGGTGCTGGATGCGGAAAGTGGCGGGGACGATTAG
Upstream 100 bases:
>100_bases GAGCAGAAGCGACGTCAGCAAAAATGCCATCAGGCGCATGTTAGAGAGGGCCTCCCGGTGCGCGAATCGCTATCATGATC TTTTTTTTATGGGATAGGCT
Downstream 100 bases:
>100_bases CGCCGCATGCTTTAATGACCGATCTCCCGAAACGGCTTACCAGTGCAACATTCCTCAAGCGGCCGCGTTGGGGAAGCATG TTTTTCTTCTTCTCAAATCG
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Beta-Lactamase Class C; Hydrolase Transmembrane Protein; Beta-Lactamase Class C Family Protein; Beta-Lactamase Class C Protein; Secreted Beta-Lactamase Family Protein; Hydrolase; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolatse Transmembrane Protein; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MRRTLSITKWVLSLVILVAAVAALWFWYTPPELIRVGSNYAAKIICSNVFLANRDPSAVLDEDVQAPGNPLLRLMRVEVD AAHATVRTGLFGSIGDGLALFRGATGCAAVPDGDLAAARGIVADLPTATGNVELWPAGDRIEVSANPAMAEVLDDPGMTG PGMRAIVIVRDGRIIGERFGPGVEGYDQPLIGWSMTKTVNAAIVGTLAGAGRLSVEEGNLLPQWAGDSRAEITLAQLLGM ESGLAFNENYGNVSDVTRMLFLEPDMAAFAANQPLLYRPGTHFSYSSGASVIVSRIWQNAFENPEEAFAWPREALFEPIG MNTAVFETDARGTFVGSSYLYASARDWARFGQLLLQDGVWNGRRILPQGWVEWMARPTEASDGDYGRGVWLHGPRVGFSP SPDPDAGFDLPQDTYWLIGHDGQVIAIIPSRRLVVVRMGLTPSKLAYKPQALVEAMVKVLDAESGGDD
Sequences:
>Translated_468_residues MRRTLSITKWVLSLVILVAAVAALWFWYTPPELIRVGSNYAAKIICSNVFLANRDPSAVLDEDVQAPGNPLLRLMRVEVD AAHATVRTGLFGSIGDGLALFRGATGCAAVPDGDLAAARGIVADLPTATGNVELWPAGDRIEVSANPAMAEVLDDPGMTG PGMRAIVIVRDGRIIGERFGPGVEGYDQPLIGWSMTKTVNAAIVGTLAGAGRLSVEEGNLLPQWAGDSRAEITLAQLLGM ESGLAFNENYGNVSDVTRMLFLEPDMAAFAANQPLLYRPGTHFSYSSGASVIVSRIWQNAFENPEEAFAWPREALFEPIG MNTAVFETDARGTFVGSSYLYASARDWARFGQLLLQDGVWNGRRILPQGWVEWMARPTEASDGDYGRGVWLHGPRVGFSP SPDPDAGFDLPQDTYWLIGHDGQVIAIIPSRRLVVVRMGLTPSKLAYKPQALVEAMVKVLDAESGGDD >Mature_468_residues MRRTLSITKWVLSLVILVAAVAALWFWYTPPELIRVGSNYAAKIICSNVFLANRDPSAVLDEDVQAPGNPLLRLMRVEVD AAHATVRTGLFGSIGDGLALFRGATGCAAVPDGDLAAARGIVADLPTATGNVELWPAGDRIEVSANPAMAEVLDDPGMTG PGMRAIVIVRDGRIIGERFGPGVEGYDQPLIGWSMTKTVNAAIVGTLAGAGRLSVEEGNLLPQWAGDSRAEITLAQLLGM ESGLAFNENYGNVSDVTRMLFLEPDMAAFAANQPLLYRPGTHFSYSSGASVIVSRIWQNAFENPEEAFAWPREALFEPIG MNTAVFETDARGTFVGSSYLYASARDWARFGQLLLQDGVWNGRRILPQGWVEWMARPTEASDGDYGRGVWLHGPRVGFSP SPDPDAGFDLPQDTYWLIGHDGQVIAIIPSRRLVVVRMGLTPSKLAYKPQALVEAMVKVLDAESGGDD
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50431; Mature: 50431
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLSITKWVLSLVILVAAVAALWFWYTPPELIRVGSNYAAKIICSNVFLANRDPSAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEEEEECCCCCHHH DEDVQAPGNPLLRLMRVEVDAAHATVRTGLFGSIGDGLALFRGATGCAAVPDGDLAAARG HHHHCCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCC IVADLPTATGNVELWPAGDRIEVSANPAMAEVLDDPGMTGPGMRAIVIVRDGRIIGERFG HHHCCCCCCCCEEEEECCCEEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCEEEHHHCC PGVEGYDQPLIGWSMTKTVNAAIVGTLAGAGRLSVEEGNLLPQWAGDSRAEITLAQLLGM CCCCCCCCCCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCCHHEHHHHHHCC ESGLAFNENYGNVSDVTRMLFLEPDMAAFAANQPLLYRPGTHFSYSSGASVIVSRIWQNA CCCCEECCCCCCHHHHHEEEEECCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHH FENPEEAFAWPREALFEPIGMNTAVFETDARGTFVGSSYLYASARDWARFGQLLLQDGVW HCCHHHHHCCCHHHHHCCCCCCEEEEECCCCCEEEECCEEEECHHHHHHHHHHHHHCCCC NGRRILPQGWVEWMARPTEASDGDYGRGVWLHGPRVGFSPSPDPDAGFDLPQDTYWLIGH CCCEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC DGQVIAIIPSRRLVVVRMGLTPSKLAYKPQALVEAMVKVLDAESGGDD CCEEEEEECCCEEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRTLSITKWVLSLVILVAAVAALWFWYTPPELIRVGSNYAAKIICSNVFLANRDPSAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEEEEEECCCCCHHH DEDVQAPGNPLLRLMRVEVDAAHATVRTGLFGSIGDGLALFRGATGCAAVPDGDLAAARG HHHHCCCCHHHEEEEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCC IVADLPTATGNVELWPAGDRIEVSANPAMAEVLDDPGMTGPGMRAIVIVRDGRIIGERFG HHHCCCCCCCCEEEEECCCEEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCEEEHHHCC PGVEGYDQPLIGWSMTKTVNAAIVGTLAGAGRLSVEEGNLLPQWAGDSRAEITLAQLLGM CCCCCCCCCCCCCCHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCCCHHEHHHHHHCC ESGLAFNENYGNVSDVTRMLFLEPDMAAFAANQPLLYRPGTHFSYSSGASVIVSRIWQNA CCCCEECCCCCCHHHHHEEEEECCCHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHH FENPEEAFAWPREALFEPIGMNTAVFETDARGTFVGSSYLYASARDWARFGQLLLQDGVW HCCHHHHHCCCHHHHHCCCCCCEEEEECCCCCEEEECCEEEECHHHHHHHHHHHHHCCCC NGRRILPQGWVEWMARPTEASDGDYGRGVWLHGPRVGFSPSPDPDAGFDLPQDTYWLIGH CCCEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC DGQVIAIIPSRRLVVVRMGLTPSKLAYKPQALVEAMVKVLDAESGGDD CCEEEEEECCCEEEEEEECCCHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA