| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634371
Identifier: 110634371
GI number: 110634371
Start: 2172777
End: 2174024
Strand: Direct
Name: 110634371
Synonym: Meso_2021
Alternate gene names: NA
Gene position: 2172777-2174024 (Clockwise)
Preceding gene: 110634370
Following gene: 110634372
Centisome position: 49.24
GC content: 61.86
Gene sequence:
>1248_bases ATGACAGATCTTTCCGCCGATATCGGCTTCTCCTCCCGCCGCCGCATCGGCAAGGCCGTCTACCAGAACAAGCTTTTTTC CAAAGACGGGCTTTCGGAGCGGCTGTTCGCGCTGCTTTTCTCCGGACTGGTCTATCCGCAGATCTGGGAAGATCCCGAAG TGGATATGGCCGCCATGGAGCTGGGCGAAGGCCACCGGGTGGTAACGATCGCCTCTGGCGGCTGCAACATGCTCGCCTAT CTCACGCGCTCGCCCGCGCATATTGACGTCGTGGACCTCAACGCCGCTCATGTGGCGCTCAACAGGCTGAAGCTCACCGC CTTCGCCGCGCTCCCCAACTTCGAGGATGTGCTGCGCTTCTTCGGCGAGCCCGGCCATAGCGCCAATGTGCCGGCCTATG ACCGTTTCATCGCGCAGAAGCTCGATGCTCCCTCCCGCCGCTATTGGGAAGGACGCGATCTCATGGGCCGGCGGCGGATT TCCGCTTTTGGCCGCGACTTTTACCGGACAGGGCTTCTCGGCTTCTTCATATCCATGGGCCACCGTGTGGCAAAGTTCCA CGGCGTTGATCCTTCGGAAATCATGCAATCGGTCAATTTGCGCGAGCAGCGCCGCTTTTTTGACGAGCAGTTGCAGCCTT TATTCGAAAAGCCGCTCATCCGCTGGGCGACCTCGCGGAAGGCCTCGCTCTTCGGGCTGGGCATTCCTCCCGCGCAGTAT GACGCCTTGCTCGGCTCTGGCGACGGCAACATGGCCGAGGTGCTTTCCACACGGCTTGAAAAGCTCGCCTGCCATTTCCC GCTCAAGCAGAACTACTTTGCCTGGGCCGCTTTCGCCCGCCGCTATCCGCGCGAGGGCGAGGCGGAGCTGCCTGCCTATC TCAAGCGCGAGAATTTCGCGACGATCCGCGCCAATACTGGCCGTGTCTCGGTTCACCACGCCAATTTCGTGGAGCTTCTG GCGGGAAAGCCCGCAGGCAGCGTCGACCGTTTTGTGCTTCTGGACGCCCAGGACTGGATGAACGACCAGCAACTCAACAC GCTCTGGAGCGAGATCACGCGCACGGCCGCTCCCGGTGCCCGCGTCATTTTCCGCACCGCCGCACAGCCGACCCTGCTTT CAGGTCGCCTCTCGGATGCGCTCCTCGACCAGTGGAGCTACAAGTTCGCGCGCTCGCGCGAGCTGTCCGCGCATGACCGC TCCGCTATCTATGGCGGCTTCCACCTTTATGTGAAGAACGACGCATGA
Upstream 100 bases:
>100_bases CGCTGATCCACAGCGCCGTCACACAGCGTCACATCTTCTTCAATCGCCTGTCATCGAGTTGCGCTAACCGGTCGGGGAAT GCCCAAGGGGACTCTAGGCG
Downstream 100 bases:
>100_bases GCGCGGCCGCCGACAGCCCTTCCCATGCGCGCCTGATGGACGGCGTCTATCGCCATCAGCGCCATATCTACGACCTCACC CGCAAATTTTACCTGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTDLSADIGFSSRRRIGKAVYQNKLFSKDGLSERLFALLFSGLVYPQIWEDPEVDMAAMELGEGHRVVTIASGGCNMLAY LTRSPAHIDVVDLNAAHVALNRLKLTAFAALPNFEDVLRFFGEPGHSANVPAYDRFIAQKLDAPSRRYWEGRDLMGRRRI SAFGRDFYRTGLLGFFISMGHRVAKFHGVDPSEIMQSVNLREQRRFFDEQLQPLFEKPLIRWATSRKASLFGLGIPPAQY DALLGSGDGNMAEVLSTRLEKLACHFPLKQNYFAWAAFARRYPREGEAELPAYLKRENFATIRANTGRVSVHHANFVELL AGKPAGSVDRFVLLDAQDWMNDQQLNTLWSEITRTAAPGARVIFRTAAQPTLLSGRLSDALLDQWSYKFARSRELSAHDR SAIYGGFHLYVKNDA
Sequences:
>Translated_415_residues MTDLSADIGFSSRRRIGKAVYQNKLFSKDGLSERLFALLFSGLVYPQIWEDPEVDMAAMELGEGHRVVTIASGGCNMLAY LTRSPAHIDVVDLNAAHVALNRLKLTAFAALPNFEDVLRFFGEPGHSANVPAYDRFIAQKLDAPSRRYWEGRDLMGRRRI SAFGRDFYRTGLLGFFISMGHRVAKFHGVDPSEIMQSVNLREQRRFFDEQLQPLFEKPLIRWATSRKASLFGLGIPPAQY DALLGSGDGNMAEVLSTRLEKLACHFPLKQNYFAWAAFARRYPREGEAELPAYLKRENFATIRANTGRVSVHHANFVELL AGKPAGSVDRFVLLDAQDWMNDQQLNTLWSEITRTAAPGARVIFRTAAQPTLLSGRLSDALLDQWSYKFARSRELSAHDR SAIYGGFHLYVKNDA >Mature_414_residues TDLSADIGFSSRRRIGKAVYQNKLFSKDGLSERLFALLFSGLVYPQIWEDPEVDMAAMELGEGHRVVTIASGGCNMLAYL TRSPAHIDVVDLNAAHVALNRLKLTAFAALPNFEDVLRFFGEPGHSANVPAYDRFIAQKLDAPSRRYWEGRDLMGRRRIS AFGRDFYRTGLLGFFISMGHRVAKFHGVDPSEIMQSVNLREQRRFFDEQLQPLFEKPLIRWATSRKASLFGLGIPPAQYD ALLGSGDGNMAEVLSTRLEKLACHFPLKQNYFAWAAFARRYPREGEAELPAYLKRENFATIRANTGRVSVHHANFVELLA GKPAGSVDRFVLLDAQDWMNDQQLNTLWSEITRTAAPGARVIFRTAAQPTLLSGRLSDALLDQWSYKFARSRELSAHDRS AIYGGFHLYVKNDA
Specific function: Unknown
COG id: COG5379
COG function: function code I; S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46757; Mature: 46626
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSADIGFSSRRRIGKAVYQNKLFSKDGLSERLFALLFSGLVYPQIWEDPEVDMAAME CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LGEGHRVVTIASGGCNMLAYLTRSPAHIDVVDLNAAHVALNRLKLTAFAALPNFEDVLRF CCCCCEEEEEECCCCCEEHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHH FGEPGHSANVPAYDRFIAQKLDAPSRRYWEGRDLMGRRRISAFGRDFYRTGLLGFFISMG HCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HRVAKFHGVDPSEIMQSVNLREQRRFFDEQLQPLFEKPLIRWATSRKASLFGLGIPPAQY CHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH DALLGSGDGNMAEVLSTRLEKLACHFPLKQNYFAWAAFARRYPREGEAELPAYLKRENFA HHEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCE TIRANTGRVSVHHANFVELLAGKPAGSVDRFVLLDAQDWMNDQQLNTLWSEITRTAAPGA EEEECCCEEEEECCHHHHHHCCCCCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHCCCCC RVIFRTAAQPTLLSGRLSDALLDQWSYKFARSRELSAHDRSAIYGGFHLYVKNDA EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECEEEEEEECCC >Mature Secondary Structure TDLSADIGFSSRRRIGKAVYQNKLFSKDGLSERLFALLFSGLVYPQIWEDPEVDMAAME CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LGEGHRVVTIASGGCNMLAYLTRSPAHIDVVDLNAAHVALNRLKLTAFAALPNFEDVLRF CCCCCEEEEEECCCCCEEHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHH FGEPGHSANVPAYDRFIAQKLDAPSRRYWEGRDLMGRRRISAFGRDFYRTGLLGFFISMG HCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HRVAKFHGVDPSEIMQSVNLREQRRFFDEQLQPLFEKPLIRWATSRKASLFGLGIPPAQY CHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH DALLGSGDGNMAEVLSTRLEKLACHFPLKQNYFAWAAFARRYPREGEAELPAYLKRENFA HHEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCE TIRANTGRVSVHHANFVELLAGKPAGSVDRFVLLDAQDWMNDQQLNTLWSEITRTAAPGA EEEECCCEEEEECCHHHHHHCCCCCCCCCEEEEEECHHHCCHHHHHHHHHHHHHHCCCCC RVIFRTAAQPTLLSGRLSDALLDQWSYKFARSRELSAHDRSAIYGGFHLYVKNDA EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA