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The map label for this gene is abrB [H]

Identifier: 110634311

GI number: 110634311

Start: 2102438

End: 2103547

Strand: Reverse

Name: abrB [H]

Synonym: Meso_1961

Alternate gene names: 110634311

Gene position: 2103547-2102438 (Counterclockwise)

Preceding gene: 110634312

Following gene: 110634309

Centisome position: 47.67

GC content: 58.2

Gene sequence:

>1110_bases
ATGGCTGTTTATGACCGATACATGGACTCTTCCGCAGGGCAGCAACAAGCTGAAAAACTGGAAAAGATGACGCCAGCCCG
TCAATGGCTGCTGCTGATATTGCTCTCGGTTGGTTTGGCCTGCGTTCTCAAGCTGCTGCAGTTTCCGGCGGCAGCCTTAC
TTGGCCCGATGTTTTCAGCCGCGGTTCTCGGGATTAATGGAGCGAGCATAAGGGTGCCCTCGCTGCCCTTCGTGGCTTCA
CAGGGCGTCATCGGTATTCTCATCGCCATGGCGATCGAGCCAGCCGTCCTGGTTGGGTTGGCGGATAAGTGGCCGCTTGT
TTTGGTCGTCGTTGTTTCCACCGTCCTAGCTTCCAGTTTTCTCGGCTGGATGATCAGCCGCTGGGGAATTCTGCCGGGCA
GCACAGCCGTATGGGGGTCGGCGCCTGGGGCTGCTACGGCGATGGTGCTCATGGCCGCAGCCTTCGGAGCCGACCAGAGA
CTGGTGGCTTTTATGCAATATCTGCGCGTGATGATGGTTGCGCTCGCCGCGGCCGTGATCGCGAGCATTGTTGCGACAGG
CCCCGAAGCCGCGTCGGAGGGCACCATATGGTTTCCTCAGCTTGACTGGCCGGCGTTTCCGGTCACGGTCTTTGTTGCCG
CTATCGGAGCTGTCTTGGGGTGGCTCCTTGGCCTGCCGTCGCCCTTTTTTCTAGGCTCGATGATATTGGGCGTAGCGCTG
CACTTAGGCACCGGGTTCCAATTCCAGCTTCCCCCGTGGCTTCTCGTGGCGGCTTACACTTTCATCGGCTGGACAATTGG
TCTCAATTTCACCCGGACCATCGCCAGGCACGCGCTGCGGGCATTGCCGCAAATCATTGGATCCATCTTGGCGCTGATGG
TCTTTTGCGGCGGGCTTGCACTGCTGCTCAATCAAATATTGGGAATCGACCTGCTTAGTGCCTATCTTGCGACCAGTCCT
GGCGGCATGGATTCCATAGCGATCATCGCAGCCGCATCCAATGACGTGAACATGTCCTTCATAATGACCATGCAGATGGC
ACGCTTTCTCTTCGTCCTTCTGTTCGGTCCCGCGATTGCCAGGCTGGTTGCCGGGGCCGTAAAGGACTAG

Upstream 100 bases:

>100_bases
TAAGGGTATGTTCCCTGCCACCATCAAACCCGCCGCTCCGCGGCGGGTTTTTTGTCGGTCCCCGCGCCTTCAGCGCTGAA
ACGCGGCTTGTCTTTTGTAC

Downstream 100 bases:

>100_bases
CGTTATTTCTGCGGAGCGAAGCTCAAGCAGCTCCTGCTCATCGCCGCGCCATCAGCCGCGCCCGACAAACGGCATCTTCG
TCGCCATAACCGTCATGAAC

Product: putative ammonia monooxygenase

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MAVYDRYMDSSAGQQQAEKLEKMTPARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSAAVLGINGASIRVPSLPFVAS
QGVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTAVWGSAPGAATAMVLMAAAFGADQR
LVAFMQYLRVMMVALAAAVIASIVATGPEAASEGTIWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVAL
HLGTGFQFQLPPWLLVAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAYLATSP
GGMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVAGAVKD

Sequences:

>Translated_369_residues
MAVYDRYMDSSAGQQQAEKLEKMTPARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSAAVLGINGASIRVPSLPFVAS
QGVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTAVWGSAPGAATAMVLMAAAFGADQR
LVAFMQYLRVMMVALAAAVIASIVATGPEAASEGTIWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVAL
HLGTGFQFQLPPWLLVAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAYLATSP
GGMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVAGAVKD
>Mature_368_residues
AVYDRYMDSSAGQQQAEKLEKMTPARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSAAVLGINGASIRVPSLPFVASQ
GVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTAVWGSAPGAATAMVLMAAAFGADQRL
VAFMQYLRVMMVALAAAVIASIVATGPEAASEGTIWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVALH
LGTGFQFQLPPWLLVAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAYLATSPG
GMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVAGAVKD

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=341, Percent_Identity=43.6950146627566, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 38803; Mature: 38672

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYDRYMDSSAGQQQAEKLEKMTPARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSA
CCCHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLGINGASIRVPSLPFVASQGVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSF
HHHCCCCCEEECCCCCCHHHCCHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHH
LGWMISRWGILPGSTAVWGSAPGAATAMVLMAAAFGADQRLVAFMQYLRVMMVALAAAVI
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ASIVATGPEAASEGTIWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVAL
HHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HLGTGFQFQLPPWLLVAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLA
HHCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLLNQILGIDLLSAYLATSPGGMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIA
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLVAGAVKD
HHHHHHCCC
>Mature Secondary Structure 
AVYDRYMDSSAGQQQAEKLEKMTPARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSA
CCHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLGINGASIRVPSLPFVASQGVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSF
HHHCCCCCEEECCCCCCHHHCCHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHHH
LGWMISRWGILPGSTAVWGSAPGAATAMVLMAAAFGADQRLVAFMQYLRVMMVALAAAVI
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ASIVATGPEAASEGTIWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVAL
HHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HLGTGFQFQLPPWLLVAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLA
HHCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLLNQILGIDLLSAYLATSPGGMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIA
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLVAGAVKD
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]