| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634250
Identifier: 110634250
GI number: 110634250
Start: 2035474
End: 2036298
Strand: Reverse
Name: 110634250
Synonym: Meso_1900
Alternate gene names: NA
Gene position: 2036298-2035474 (Counterclockwise)
Preceding gene: 110634252
Following gene: 110634248
Centisome position: 46.15
GC content: 52.85
Gene sequence:
>825_bases ATGGCGAACACGGCAGAAGTGTATTCTTTCCCCGGCAGAGGCGCGGGGAATAACGATTCAAGCAGTACAAAAAATCCGGC TAGGAAAAAGCCTAGAGAGTGGCGCAAGCACGGCCATTATGGGCCGGATAACAACGGATTGGATGACGCGTTGGCACAAC TAGGTGCCGTAAGGCAGTTTTGCCGTGAATGGCTGGAACTTCCTGCCCGCGAAGTCAAGATGCTACTCTTCATCTTTGGC GAAACTGTATTGTGGGGAAAGCCGGAAAAACTATTTACCCATGAGTTCATCGAGAAGGGTTTTGACGGTCCAAAGGGGAA CAGAGGAACGGGTATCGGCAGAACCCAATCTAAAGAGATACTGGCCTCCCTCGAAGCCAAGGGATTGATTGCTGTGAATC GCTCCGGACTTAAAAAGGGAATGATTATTCGCCCAAACATAGACTGGAACCCCCCGGCCGCGCCCGCCATCCCAGATGCA CCCCCGGAGGGAGTACGGATACGTCAACGCCCCTCTGATCGAAGGTCTCTTGAGACGTCCACGCTAGAGCGAACCATGCG CAACGCATTAATGCGAGAATACACCAAGGTTCCCGCAGCGAACATGAGGCCGTGGACGGAACACCAACATTCTATGGTCG CGCAAGCAATCAGAGGACATTGGTCTGGCATGGGAGTCGAGCAATGCCACGCGTTCATTGATTGGCTAGTGGAGCGCTGG GCCGGCCTTGGTGAGTTTTATACCATGCCACAATACCCGGACATAGATTTCATCTGCATCCACGGCAGAGTGCTCCGTTT GGAGTTCGAAAATGCTCAAAAATGA
Upstream 100 bases:
>100_bases CCGCCTTGCGCGAGGTGGCGGACTTTTTAGGCGGGGGCGGCTCCACACTTTTTCCTTTGGTCGGGAGTGGGCCGCCCCCG CAGACCAAAGGAAATCCGAA
Downstream 100 bases:
>100_bases AGGGTTCTGCTGGTCGGAAATCCGGCCACTCACCGGTCGGAAATCCGACCCCAATATAGAAGAAGGGTAGAAGAAGGGGA TTTTAGAAAGAGATTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MANTAEVYSFPGRGAGNNDSSSTKNPARKKPREWRKHGHYGPDNNGLDDALAQLGAVRQFCREWLELPAREVKMLLFIFG ETVLWGKPEKLFTHEFIEKGFDGPKGNRGTGIGRTQSKEILASLEAKGLIAVNRSGLKKGMIIRPNIDWNPPAAPAIPDA PPEGVRIRQRPSDRRSLETSTLERTMRNALMREYTKVPAANMRPWTEHQHSMVAQAIRGHWSGMGVEQCHAFIDWLVERW AGLGEFYTMPQYPDIDFICIHGRVLRLEFENAQK
Sequences:
>Translated_274_residues MANTAEVYSFPGRGAGNNDSSSTKNPARKKPREWRKHGHYGPDNNGLDDALAQLGAVRQFCREWLELPAREVKMLLFIFG ETVLWGKPEKLFTHEFIEKGFDGPKGNRGTGIGRTQSKEILASLEAKGLIAVNRSGLKKGMIIRPNIDWNPPAAPAIPDA PPEGVRIRQRPSDRRSLETSTLERTMRNALMREYTKVPAANMRPWTEHQHSMVAQAIRGHWSGMGVEQCHAFIDWLVERW AGLGEFYTMPQYPDIDFICIHGRVLRLEFENAQK >Mature_273_residues ANTAEVYSFPGRGAGNNDSSSTKNPARKKPREWRKHGHYGPDNNGLDDALAQLGAVRQFCREWLELPAREVKMLLFIFGE TVLWGKPEKLFTHEFIEKGFDGPKGNRGTGIGRTQSKEILASLEAKGLIAVNRSGLKKGMIIRPNIDWNPPAAPAIPDAP PEGVRIRQRPSDRRSLETSTLERTMRNALMREYTKVPAANMRPWTEHQHSMVAQAIRGHWSGMGVEQCHAFIDWLVERWA GLGEFYTMPQYPDIDFICIHGRVLRLEFENAQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31031; Mature: 30900
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTAEVYSFPGRGAGNNDSSSTKNPARKKPREWRKHGHYGPDNNGLDDALAQLGAVRQF CCCCCCCEECCCCCCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH CREWLELPAREVKMLLFIFGETVLWGKPEKLFTHEFIEKGFDGPKGNRGTGIGRTQSKEI HHHHHHCCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LASLEAKGLIAVNRSGLKKGMIIRPNIDWNPPAAPAIPDAPPEGVRIRQRPSDRRSLETS HHHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH TLERTMRNALMREYTKVPAANMRPWTEHQHSMVAQAIRGHWSGMGVEQCHAFIDWLVERW HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGLGEFYTMPQYPDIDFICIHGRVLRLEFENAQK HCCCHHCCCCCCCCCCEEEECCEEEEEECCCCCC >Mature Secondary Structure ANTAEVYSFPGRGAGNNDSSSTKNPARKKPREWRKHGHYGPDNNGLDDALAQLGAVRQF CCCCCCEECCCCCCCCCCCCCCCCCHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHH CREWLELPAREVKMLLFIFGETVLWGKPEKLFTHEFIEKGFDGPKGNRGTGIGRTQSKEI HHHHHHCCHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LASLEAKGLIAVNRSGLKKGMIIRPNIDWNPPAAPAIPDAPPEGVRIRQRPSDRRSLETS HHHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH TLERTMRNALMREYTKVPAANMRPWTEHQHSMVAQAIRGHWSGMGVEQCHAFIDWLVERW HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AGLGEFYTMPQYPDIDFICIHGRVLRLEFENAQK HCCCHHCCCCCCCCCCEEEECCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA