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The map label for this gene is 110634248

Identifier: 110634248

GI number: 110634248

Start: 2033708

End: 2034958

Strand: Reverse

Name: 110634248

Synonym: Meso_1898

Alternate gene names: NA

Gene position: 2034958-2033708 (Counterclockwise)

Preceding gene: 110634250

Following gene: 110634247

Centisome position: 46.12

GC content: 60.59

Gene sequence:

>1251_bases
TTGTCCCGCTTCAGTTTTTTCCGCCGCGCCACACAGACAGCCGCCGACGCGGCGACGGAACAGCGTTCGCTTGCCGGCCC
TGAAGATTGGTTGATTGAGTTATTCGCCGCTGCCCCGGCGTTGTCTGGCGTATCGGTCTCACCGCACACCGCCCTTCGCG
TTCCCGCCGTCCGTGCTGCCGTCGAACTGATCGCGGGCACCACCGGCACCCTGCCGGTAAAGGTTTTCCAATCGGCTGAC
GGCACGAGCAAGGAAGTCGCACACGATCATCCGGCAGCGTCGATTGTCCATCGCGACGCCAATCCCTGGACATCGGCCGG
AGCGCTTCGCTCACAACTCACCATGGATGCCATGTTGAACGGCGGCGGCTTTGCTTTTGCGAACCGTGACCGCGATGGCC
GTGTTGTCGAACTTGTCCGGTTATCTCCGACCGCCGTCATGGTCGAAACAGACACCCTGACCGGCGAGCCGCGTTTCCGC
GTCACGGAAGGCCGTGGGCAACACATCTACGGATTTCGAGACATTATCCATATTGCTCCGCTCGCATCGCTGGACGGCGT
GAAGGGCGAAGCGCCTATCCGCTCTGCCCGTGAGGCCATCGGGCTTGCCGTCACGCTCGAAGCTCACGCGGCACGGCTCT
TCGCCAATCAGGCCCGCCCCTCCGGTATTTTGAGTTTCGCCAAGAGCTTGACCGCAGACGCGGCGGCAAAGATGAAACAG
TCTTGGCAGAGCATGACCGCCAACGGCGGAACCGCCGTGCTTGACGCAGACGCTACTTATACGGCGCTCACCCTCAAATC
TACTGACAGTCAGTTCCTTGAGCTTCGCCAATTCCAGATTTTGGAGATCGCGCGAGCATTCAATGTGCCTCCTACGTTCC
TGGCCGATTTCTCTCGCGCTACATGGTCGAACATCACGGAAGCCAACCGGCAGCTCGTGACGTTCTGTCTTATGCCTTGG
TTCCGGGCATGGGAGGCCGCTTACCGCCGCGTCCTGCTTTCGGACGAAGATCGGCAGGCAGGCATTACCGTTGAGTTTGT
CGTGGACGGCCTCTTGCAAGGCAACGCAACCGAGCGGGCCGAAGCCGTCGCCAAATGGCGGGCCGCTGGCGTTATGACCG
CGAACGAAGCCCGCCGCCTCGAAAACCTTCCCGCCATGGATGGCGGCAACAAGCTGGAAAATCCCTATACTTCCACGGGC
AAGGCCGAAAATTTGCAACCGGTTGCAAAAAAGGAAAAGGCCGATGCCTGA

Upstream 100 bases:

>100_bases
TTTATCTTTCCGGCTCGTTGTGGTTCGGGCTTAAGAGCGGTGCCGCGTTCCCTCGCCCTTTCTGGCGCGGCACCGATCCT
TTCCACCCCGGAGAAAGATA

Downstream 100 bases:

>100_bases
CCTTCCGACGCATCGCCGGTTTTTCGGGGACCGGGAACACGATTTCCGGCTTACGCCCGAACTCATCATTGAGCTTGAAC
GCGTCACGAATACGGGCATC

Product: HK97 family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSRFSFFRRATQTAADAATEQRSLAGPEDWLIELFAAAPALSGVSVSPHTALRVPAVRAAVELIAGTTGTLPVKVFQSAD
GTSKEVAHDHPAASIVHRDANPWTSAGALRSQLTMDAMLNGGGFAFANRDRDGRVVELVRLSPTAVMVETDTLTGEPRFR
VTEGRGQHIYGFRDIIHIAPLASLDGVKGEAPIRSAREAIGLAVTLEAHAARLFANQARPSGILSFAKSLTADAAAKMKQ
SWQSMTANGGTAVLDADATYTALTLKSTDSQFLELRQFQILEIARAFNVPPTFLADFSRATWSNITEANRQLVTFCLMPW
FRAWEAAYRRVLLSDEDRQAGITVEFVVDGLLQGNATERAEAVAKWRAAGVMTANEARRLENLPAMDGGNKLENPYTSTG
KAENLQPVAKKEKADA

Sequences:

>Translated_416_residues
MSRFSFFRRATQTAADAATEQRSLAGPEDWLIELFAAAPALSGVSVSPHTALRVPAVRAAVELIAGTTGTLPVKVFQSAD
GTSKEVAHDHPAASIVHRDANPWTSAGALRSQLTMDAMLNGGGFAFANRDRDGRVVELVRLSPTAVMVETDTLTGEPRFR
VTEGRGQHIYGFRDIIHIAPLASLDGVKGEAPIRSAREAIGLAVTLEAHAARLFANQARPSGILSFAKSLTADAAAKMKQ
SWQSMTANGGTAVLDADATYTALTLKSTDSQFLELRQFQILEIARAFNVPPTFLADFSRATWSNITEANRQLVTFCLMPW
FRAWEAAYRRVLLSDEDRQAGITVEFVVDGLLQGNATERAEAVAKWRAAGVMTANEARRLENLPAMDGGNKLENPYTSTG
KAENLQPVAKKEKADA
>Mature_415_residues
SRFSFFRRATQTAADAATEQRSLAGPEDWLIELFAAAPALSGVSVSPHTALRVPAVRAAVELIAGTTGTLPVKVFQSADG
TSKEVAHDHPAASIVHRDANPWTSAGALRSQLTMDAMLNGGGFAFANRDRDGRVVELVRLSPTAVMVETDTLTGEPRFRV
TEGRGQHIYGFRDIIHIAPLASLDGVKGEAPIRSAREAIGLAVTLEAHAARLFANQARPSGILSFAKSLTADAAAKMKQS
WQSMTANGGTAVLDADATYTALTLKSTDSQFLELRQFQILEIARAFNVPPTFLADFSRATWSNITEANRQLVTFCLMPWF
RAWEAAYRRVLLSDEDRQAGITVEFVVDGLLQGNATERAEAVAKWRAAGVMTANEARRLENLPAMDGGNKLENPYTSTGK
AENLQPVAKKEKADA

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 44896; Mature: 44765

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFSFFRRATQTAADAATEQRSLAGPEDWLIELFAAAPALSGVSVSPHTALRVPAVRAA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHH
VELIAGTTGTLPVKVFQSADGTSKEVAHDHPAASIVHRDANPWTSAGALRSQLTMDAMLN
HHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHCC
GGGFAFANRDRDGRVVELVRLSPTAVMVETDTLTGEPRFRVTEGRGQHIYGFRDIIHIAP
CCCEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEECCCCCEEHHHHHHHHHHC
LASLDGVKGEAPIRSAREAIGLAVTLEAHAARLFANQARPSGILSFAKSLTADAAAKMKQ
HHHCCCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SWQSMTANGGTAVLDADATYTALTLKSTDSQFLELRQFQILEIARAFNVPPTFLADFSRA
HHHHHCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TWSNITEANRQLVTFCLMPWFRAWEAAYRRVLLSDEDRQAGITVEFVVDGLLQGNATERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHHH
EAVAKWRAAGVMTANEARRLENLPAMDGGNKLENPYTSTGKAENLQPVAKKEKADA
HHHHHHHHHCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SRFSFFRRATQTAADAATEQRSLAGPEDWLIELFAAAPALSGVSVSPHTALRVPAVRAA
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHH
VELIAGTTGTLPVKVFQSADGTSKEVAHDHPAASIVHRDANPWTSAGALRSQLTMDAMLN
HHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHCC
GGGFAFANRDRDGRVVELVRLSPTAVMVETDTLTGEPRFRVTEGRGQHIYGFRDIIHIAP
CCCEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCCCEEEECCCCCEEHHHHHHHHHHC
LASLDGVKGEAPIRSAREAIGLAVTLEAHAARLFANQARPSGILSFAKSLTADAAAKMKQ
HHHCCCCCCCCHHHHHHHHHCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SWQSMTANGGTAVLDADATYTALTLKSTDSQFLELRQFQILEIARAFNVPPTFLADFSRA
HHHHHCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TWSNITEANRQLVTFCLMPWFRAWEAAYRRVLLSDEDRQAGITVEFVVDGLLQGNATERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHHH
EAVAKWRAAGVMTANEARRLENLPAMDGGNKLENPYTSTGKAENLQPVAKKEKADA
HHHHHHHHHCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA