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The map label for this gene is 110634245

Identifier: 110634245

GI number: 110634245

Start: 2031643

End: 2032812

Strand: Reverse

Name: 110634245

Synonym: Meso_1895

Alternate gene names: NA

Gene position: 2032812-2031643 (Counterclockwise)

Preceding gene: 110634246

Following gene: 110634244

Centisome position: 46.07

GC content: 62.91

Gene sequence:

>1170_bases
ATGACCAAGCATATGAAAATCGAAACGCGTTCCGAACCGCTCGAAATCCGCAGCGATGAGAACACCGACCCCGTTGCAGC
CGCGACGGCGGCGGTCGAGGAACTTCGCTCCGCGTCGGAACAATTCCGCACGTCGCAGGCCGAAGCCCTTCGCGCTGCAA
ACGACCGCATTGCCGCGCTCGAAACCCGCCTTTCCCGTCCGAACGTCCAGACCGAACAGCGCAACGAGCCAAGCATCGAA
CAGCGCGCCTTCAACAATTTCCTGCGCTTCGGCAATACCAATCTCAGCGCCGACGAACAGCGCGCCCTCACGGTCTCGAC
CGACGCGGCAGGCGGCTTCCTTGTGCCCGATAATTTCGTTGCCGAGATGCTGCGCAATGTCGTCCAGTTCTCGCCCGTGC
GTCAGTATGCGCGCGTGATGAACGTGGCCGGCGCGAACGTCCGCATGCCGAAGCGCACCGGGACCATGACCGCCGCGTGG
GTTGCTGAGACCGGTGACCGCGCCAGCACCCAACCGGCCTATGGCGAGGTGGAACTGACCCCGTTTGAAGCGGCATGCTA
CGTCGATATCAGCAATCAGTTGCTGGAAGACAGCGCGTTCAACCTCGAAAGCGAACTCGCATTCGACGCGGCGGAAGAGT
TCGGCCGGCTGGAAAGCGTTGCATTCGTCGCCGGAGACGGCACGGGCAAGCCGAAGGGCATCCTCGCGGATACGGGCATC
GCAACCGTAGTGTCAGGCAACGCCTCGACGCTGGGCACCGCACCAGCCGACAAGCTGATTGACTTGCTCTACAAGCTCGC
ACCGGCCTATCGCCGCAATGCAACGTGGGCGCTCAATTCCACGACGCTGGCATTGGTGCGCAAGCTGAAGGACAGCCAGG
GTAATTTCTTGTGGCAACCGGGCATCGCCAACGGACAGCCAGAGACGATCCTTGGCCGTCCCGTCGCCGAGATGCCTGAC
ATGCCGGACGTGACGGCGGACGCCCTGCCAATCCTGATCGGTGATTTCCAGCAGGGATACCGGATCGTGGACCGGGTTTC
GCTCGCCGTCCTGCGCGACCCCTACACCATGGCGTCCAAGGGTCAGACCCGGTTCCACATGCGCCGTCGCGTCGGCGGCG
GTGTAGTGAAGGCCGAAGCCTTCAAGGCGCTGAAAATCGCCGCCTCCTAA

Upstream 100 bases:

>100_bases
GGGAGCGGCGTGACCTCCGTCCGAGAAACAGGCCGCGAGAGCGCAGCGGCCTTTGTTGCAACGTGCCGCAAGGCCGCGCT
CGCTCTGAAAGGAAACTGAC

Downstream 100 bases:

>100_bases
TCGACAGCACGGGCGGCGGGGATAAACCCTGCCGCCTAACCCCTGAAACCCGATTGAACGCCGTGACGGCAGTCCAGTCC
CTTAGAAGGATTTTTTCCAT

Product: HK97 family phage major capsid protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Phage Capsid Protein; Capsid Protein Of Prophage; Phage Prohead Protease; Capsid Protein HK; Phage Capsid Family; Prophage; Phage Capsid Protein Gp; Capsid; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; Phage-Related Head Protein; PhiRv2 Prophage Protein; Phage Phi-C31 Capsid; Capsid-Like Protein; PhiRV1 Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Capsid C; Phage Capsid Family Protein

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MTKHMKIETRSEPLEIRSDENTDPVAAATAAVEELRSASEQFRTSQAEALRAANDRIAALETRLSRPNVQTEQRNEPSIE
QRAFNNFLRFGNTNLSADEQRALTVSTDAAGGFLVPDNFVAEMLRNVVQFSPVRQYARVMNVAGANVRMPKRTGTMTAAW
VAETGDRASTQPAYGEVELTPFEAACYVDISNQLLEDSAFNLESELAFDAAEEFGRLESVAFVAGDGTGKPKGILADTGI
ATVVSGNASTLGTAPADKLIDLLYKLAPAYRRNATWALNSTTLALVRKLKDSQGNFLWQPGIANGQPETILGRPVAEMPD
MPDVTADALPILIGDFQQGYRIVDRVSLAVLRDPYTMASKGQTRFHMRRRVGGGVVKAEAFKALKIAAS

Sequences:

>Translated_389_residues
MTKHMKIETRSEPLEIRSDENTDPVAAATAAVEELRSASEQFRTSQAEALRAANDRIAALETRLSRPNVQTEQRNEPSIE
QRAFNNFLRFGNTNLSADEQRALTVSTDAAGGFLVPDNFVAEMLRNVVQFSPVRQYARVMNVAGANVRMPKRTGTMTAAW
VAETGDRASTQPAYGEVELTPFEAACYVDISNQLLEDSAFNLESELAFDAAEEFGRLESVAFVAGDGTGKPKGILADTGI
ATVVSGNASTLGTAPADKLIDLLYKLAPAYRRNATWALNSTTLALVRKLKDSQGNFLWQPGIANGQPETILGRPVAEMPD
MPDVTADALPILIGDFQQGYRIVDRVSLAVLRDPYTMASKGQTRFHMRRRVGGGVVKAEAFKALKIAAS
>Mature_388_residues
TKHMKIETRSEPLEIRSDENTDPVAAATAAVEELRSASEQFRTSQAEALRAANDRIAALETRLSRPNVQTEQRNEPSIEQ
RAFNNFLRFGNTNLSADEQRALTVSTDAAGGFLVPDNFVAEMLRNVVQFSPVRQYARVMNVAGANVRMPKRTGTMTAAWV
AETGDRASTQPAYGEVELTPFEAACYVDISNQLLEDSAFNLESELAFDAAEEFGRLESVAFVAGDGTGKPKGILADTGIA
TVVSGNASTLGTAPADKLIDLLYKLAPAYRRNATWALNSTTLALVRKLKDSQGNFLWQPGIANGQPETILGRPVAEMPDM
PDVTADALPILIGDFQQGYRIVDRVSLAVLRDPYTMASKGQTRFHMRRRVGGGVVKAEAFKALKIAAS

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42258; Mature: 42127

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKHMKIETRSEPLEIRSDENTDPVAAATAAVEELRSASEQFRTSQAEALRAANDRIAAL
CCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ETRLSRPNVQTEQRNEPSIEQRAFNNFLRFGNTNLSADEQRALTVSTDAAGGFLVPDNFV
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCHHH
AEMLRNVVQFSPVRQYARVMNVAGANVRMPKRTGTMTAAWVAETGDRASTQPAYGEVELT
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC
PFEAACYVDISNQLLEDSAFNLESELAFDAAEEFGRLESVAFVAGDGTGKPKGILADTGI
CCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCEEECCCE
ATVVSGNASTLGTAPADKLIDLLYKLAPAYRRNATWALNSTTLALVRKLKDSQGNFLWQP
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCEEECC
GIANGQPETILGRPVAEMPDMPDVTADALPILIGDFQQGYRIVDRVSLAVLRDPYTMASK
CCCCCCCCCEECCCHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHCC
GQTRFHMRRRVGGGVVKAEAFKALKIAAS
CCHHHHHHHHHCCCEEEHHHHHHEEEECC
>Mature Secondary Structure 
TKHMKIETRSEPLEIRSDENTDPVAAATAAVEELRSASEQFRTSQAEALRAANDRIAAL
CCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ETRLSRPNVQTEQRNEPSIEQRAFNNFLRFGNTNLSADEQRALTVSTDAAGGFLVPDNFV
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEECCCHHH
AEMLRNVVQFSPVRQYARVMNVAGANVRMPKRTGTMTAAWVAETGDRASTQPAYGEVELT
HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC
PFEAACYVDISNQLLEDSAFNLESELAFDAAEEFGRLESVAFVAGDGTGKPKGILADTGI
CCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCEEECCCE
ATVVSGNASTLGTAPADKLIDLLYKLAPAYRRNATWALNSTTLALVRKLKDSQGNFLWQP
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCEEECC
GIANGQPETILGRPVAEMPDMPDVTADALPILIGDFQQGYRIVDRVSLAVLRDPYTMASK
CCCCCCCCCEECCCHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHCC
GQTRFHMRRRVGGGVVKAEAFKALKIAAS
CCHHHHHHHHHCCCEEEHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA