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The map label for this gene is yjqC [H]

Identifier: 110634226

GI number: 110634226

Start: 2015515

End: 2016393

Strand: Reverse

Name: yjqC [H]

Synonym: Meso_1876

Alternate gene names: 110634226

Gene position: 2016393-2015515 (Counterclockwise)

Preceding gene: 110634227

Following gene: 110634225

Centisome position: 45.7

GC content: 62.34

Gene sequence:

>879_bases
ATGTTCTTTCGCACGAACCAATTCCAGTACAATGCAAAGCCGGAAAGACCGGATCCGGTCTACGCCAAAAAGCTGCAGGA
GGTGCTGGGCGGCCAGTGGGGCGAGATCAGCGTCATGATGACCTATCTCTTCCAGGGCTGGAACTGCCGGGCGCCGGCAA
AATACCGCGACATGATCCTCGATATCGGGACCGAGGAGATCGCGCATGTGGAAATGCTCGCGACGATGATCGCGCGGCTC
CTGGAAACATCTCCGGTGGAGGCAAAGGAGGGGGCCGCGAAGAACTCTGCAATTGGAGCCGTGCTGGGCGGCTCGCGCCT
GGAGGACGTGATCGTCTCCGGCATGAACCCGCAACATGCGATCGTCTCGGGGCAGGGCGCTACCCCGACCGACAGCGTCG
GCTATCCGTGGACGTCCCGCTACACCATCGCTTCAGGCAATCTGCTCGCGGATTTCCGATTCAACGTAACGGCCGAATCG
CAGGGGCGGCTGCAGGTGTGCCGGCTCTATGAGCTGACCGACGATCCGGGTGTGCGCGATATGCTCTCCTTCCTGATTGC
GAGGGACACGATGCACCAGAACCAATGGCTGGTGGCGATTGCCGAACTTGAAGCGGACGGGCTCGATACGACGCCGGTGC
CGATGAGCTTTCCGCAGGAGAAGGAACTGGCGGAAGTGGCGTATCAGTTCTGGAACTGCTCCGGCGGAGCAGAAAGCCAG
GAAGGCCGCTGGGCAGCGGGGCCGGCGCCCGACGGGAAGGGCGAATTCGAATATCTCGCCGATCCGCAGCCCATGGGCGA
GATCGTGGAAGAGCTGGAGCAGGGCGATCCCCTGCTGCATGGAACGCCCAAAACGCCCATGCCGCCCTCGGCCACTTGA

Upstream 100 bases:

>100_bases
TAAATTCTGCTTGGCCGCACAGGCCGGGAACATGCGGCATCCCCTGCGGTTCGCGACGTACCGCCGCTTTGCGGTTCATC
CCGAACCAGAGGAGAGCAGG

Downstream 100 bases:

>100_bases
CCCTGCGGAAGTAGGAAGAAGTTCCGCAAAACAGGAACAATCGAGCACGTTTCTCGTTCTCGCAATCCGGCAAGACTCGG
CCGGATTGCAAGACGGACGA

Product: manganese containing catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MFFRTNQFQYNAKPERPDPVYAKKLQEVLGGQWGEISVMMTYLFQGWNCRAPAKYRDMILDIGTEEIAHVEMLATMIARL
LETSPVEAKEGAAKNSAIGAVLGGSRLEDVIVSGMNPQHAIVSGQGATPTDSVGYPWTSRYTIASGNLLADFRFNVTAES
QGRLQVCRLYELTDDPGVRDMLSFLIARDTMHQNQWLVAIAELEADGLDTTPVPMSFPQEKELAEVAYQFWNCSGGAESQ
EGRWAAGPAPDGKGEFEYLADPQPMGEIVEELEQGDPLLHGTPKTPMPPSAT

Sequences:

>Translated_292_residues
MFFRTNQFQYNAKPERPDPVYAKKLQEVLGGQWGEISVMMTYLFQGWNCRAPAKYRDMILDIGTEEIAHVEMLATMIARL
LETSPVEAKEGAAKNSAIGAVLGGSRLEDVIVSGMNPQHAIVSGQGATPTDSVGYPWTSRYTIASGNLLADFRFNVTAES
QGRLQVCRLYELTDDPGVRDMLSFLIARDTMHQNQWLVAIAELEADGLDTTPVPMSFPQEKELAEVAYQFWNCSGGAESQ
EGRWAAGPAPDGKGEFEYLADPQPMGEIVEELEQGDPLLHGTPKTPMPPSAT
>Mature_292_residues
MFFRTNQFQYNAKPERPDPVYAKKLQEVLGGQWGEISVMMTYLFQGWNCRAPAKYRDMILDIGTEEIAHVEMLATMIARL
LETSPVEAKEGAAKNSAIGAVLGGSRLEDVIVSGMNPQHAIVSGQGATPTDSVGYPWTSRYTIASGNLLADFRFNVTAES
QGRLQVCRLYELTDDPGVRDMLSFLIARDTMHQNQWLVAIAELEADGLDTTPVPMSFPQEKELAEVAYQFWNCSGGAESQ
EGRWAAGPAPDGKGEFEYLADPQPMGEIVEELEQGDPLLHGTPKTPMPPSAT

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 32092; Mature: 32092

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRTNQFQYNAKPERPDPVYAKKLQEVLGGQWGEISVMMTYLFQGWNCRAPAKYRDMIL
CCEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
DIGTEEIAHVEMLATMIARLLETSPVEAKEGAAKNSAIGAVLGGSRLEDVIVSGMNPQHA
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCEE
IVSGQGATPTDSVGYPWTSRYTIASGNLLADFRFNVTAESQGRLQVCRLYELTDDPGVRD
EEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCHHH
MLSFLIARDTMHQNQWLVAIAELEADGLDTTPVPMSFPQEKELAEVAYQFWNCSGGAESQ
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
EGRWAAGPAPDGKGEFEYLADPQPMGEIVEELEQGDPLLHGTPKTPMPPSAT
CCCEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MFFRTNQFQYNAKPERPDPVYAKKLQEVLGGQWGEISVMMTYLFQGWNCRAPAKYRDMIL
CCEECCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
DIGTEEIAHVEMLATMIARLLETSPVEAKEGAAKNSAIGAVLGGSRLEDVIVSGMNPQHA
HCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEECCCCHHHHHHHCCCCCCEE
IVSGQGATPTDSVGYPWTSRYTIASGNLLADFRFNVTAESQGRLQVCRLYELTDDPGVRD
EEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCHHH
MLSFLIARDTMHQNQWLVAIAELEADGLDTTPVPMSFPQEKELAEVAYQFWNCSGGAESQ
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
EGRWAAGPAPDGKGEFEYLADPQPMGEIVEELEQGDPLLHGTPKTPMPPSAT
CCCEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]