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The map label for this gene is dppC [H]

Identifier: 110634207

GI number: 110634207

Start: 1996084

End: 1996935

Strand: Direct

Name: dppC [H]

Synonym: Meso_1857

Alternate gene names: 110634207

Gene position: 1996084-1996935 (Clockwise)

Preceding gene: 110634206

Following gene: 110634208

Centisome position: 45.24

GC content: 63.85

Gene sequence:

>852_bases
ATGAGCAAGGCTGATCCCAGATGGCGCGGATGGCGCCGCTTCGCCCGCAACCGCTTGTCGGTGTTTGGGGCGGCGCTCAT
CGCGCTCGTGCTATTTTGCGCCCTCTTCGCTCCCTATGTGGCGCCCTACCCAGAGCATGCCGGCGTGGTGGTGAACTTCG
CCGACGCAAACAAGCCGCCGAGCGCGAAGTATTGGCTTGGCACGGACAGCGTGGGCCGGGACGTGCTGAGCCGCATTATC
TTCGGCTTCCGCAACTCCCTGATGCTCGGAGCGGTCGTCGTATCCCTGGCGATTTCCCTCGGCACCATCGTCGGGCTCGT
AGCGGCCTATCTCGGCGGCAAGGTGGAGAGCGTGCTGATGCGTGTCACCGACATCTTCCTCGCCATACCCTCGCTGGTGC
TGGCCATGGCCATCCTTGGCATCTCCCAGCCGTCGCAGATGCTGGCAATGATCGCCATGGCAGTCGCCTGGTGGCCCTGG
CACGCGCGGCTGGTCTACGGCATCGTCCGCTCGCTGAGGCACGAGGGTTTCGTGACCGCTGCCGAAGTTGTGGGCGCCTC
TCCCCTGAAGGTGATGTTTGGCGAGCTCCTGCCGAACTGTGCGCCCAACCTGCTGACCAAGGCGAGCTTGGACATGGGTT
TCGTGATCCTGCTCGGAGCCAGCCTCAGCTTTCTCGGCATGGGCGCTCCGCCGCCCACCCCCGACCTTGGCACCATGGTA
TCGGAAGGCTCCCAATACCTTCCCGACCTATGGTGGCTTTCCATCACCGCGGGTCTCGCGATCTTCGTGATCGTCCTCGG
GTTCAACCTGGTCGCGGACGGCCTGCGCGATCTCTTCGATATCGTTGGATAA

Upstream 100 bases:

>100_bases
TCGCCGTGGTCATGCTGATTTCGGTCTTCTTCGTGCTGATCAATATGATCATCGACACGATCGTCTCCTTTATCGACCCC
AAGATCAGGTTGAAGGCCTC

Downstream 100 bases:

>100_bases
GACATGGAAGATCTCCTGCGGATAGATGACCTGAGACTGACCTTCGAGACCCATGACGGCCCGGTCAGCGTCCTGCGTGG
CGTCGATCTGACGGTCGGAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSKADPRWRGWRRFARNRLSVFGAALIALVLFCALFAPYVAPYPEHAGVVVNFADANKPPSAKYWLGTDSVGRDVLSRII
FGFRNSLMLGAVVVSLAISLGTIVGLVAAYLGGKVESVLMRVTDIFLAIPSLVLAMAILGISQPSQMLAMIAMAVAWWPW
HARLVYGIVRSLRHEGFVTAAEVVGASPLKVMFGELLPNCAPNLLTKASLDMGFVILLGASLSFLGMGAPPPTPDLGTMV
SEGSQYLPDLWWLSITAGLAIFVIVLGFNLVADGLRDLFDIVG

Sequences:

>Translated_283_residues
MSKADPRWRGWRRFARNRLSVFGAALIALVLFCALFAPYVAPYPEHAGVVVNFADANKPPSAKYWLGTDSVGRDVLSRII
FGFRNSLMLGAVVVSLAISLGTIVGLVAAYLGGKVESVLMRVTDIFLAIPSLVLAMAILGISQPSQMLAMIAMAVAWWPW
HARLVYGIVRSLRHEGFVTAAEVVGASPLKVMFGELLPNCAPNLLTKASLDMGFVILLGASLSFLGMGAPPPTPDLGTMV
SEGSQYLPDLWWLSITAGLAIFVIVLGFNLVADGLRDLFDIVG
>Mature_282_residues
SKADPRWRGWRRFARNRLSVFGAALIALVLFCALFAPYVAPYPEHAGVVVNFADANKPPSAKYWLGTDSVGRDVLSRIIF
GFRNSLMLGAVVVSLAISLGTIVGLVAAYLGGKVESVLMRVTDIFLAIPSLVLAMAILGISQPSQMLAMIAMAVAWWPWH
ARLVYGIVRSLRHEGFVTAAEVVGASPLKVMFGELLPNCAPNLLTKASLDMGFVILLGASLSFLGMGAPPPTPDLGTMVS
EGSQYLPDLWWLSITAGLAIFVIVLGFNLVADGLRDLFDIVG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=40.0763358778626, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787054, Length=270, Percent_Identity=35.9259259259259, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=43.2624113475177, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=37.7777777777778, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787549, Length=278, Percent_Identity=33.8129496402878, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787498, Length=271, Percent_Identity=33.9483394833948, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788505, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30347; Mature: 30216

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SKADPRWRGWRRFARNRLSVFGAALIALVLFCALFAPYVAPYPEHAGVVVNFADANKPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
SAKYWLGTDSVGRDVLSRIIFGFRNSLMLGAVVVSLAISLGTIVGLVAAYLGGKVESVLM
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RVTDIFLAIPSLVLAMAILGISQPSQMLAMIAMAVAWWPWHARLVYGIVRSLRHEGFVTA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
AEVVGASPLKVMFGELLPNCAPNLLTKASLDMGFVILLGASLSFLGMGAPPPTPDLGTMV
HHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SEGSQYLPDLWWLSITAGLAIFVIVLGFNLVADGLRDLFDIVG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]