| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yxeK [H]
Identifier: 110634181
GI number: 110634181
Start: 1965587
End: 1966879
Strand: Reverse
Name: yxeK [H]
Synonym: Meso_1831
Alternate gene names: 110634181
Gene position: 1966879-1965587 (Counterclockwise)
Preceding gene: 110634182
Following gene: 110634180
Centisome position: 44.58
GC content: 62.41
Gene sequence:
>1293_bases ATGCGCAAACGCAGGATGTATCTTGTCAGCTGGCTGAACTCCTCGGGGGTTCTCCCCAATTCCTGGAATGAGGGCCGGGG AAACCGGGCGAGGATCTTTGACCTGGAGAATTATATCCGCAGCGCCGAGATCGCCCGGCGCGGCCGGATCGATGCCTTCT TTCTAGCCGACCAGCCGCAACTAACCCCCAACCCGAAGGTTCGTCCTGAGTATCCGTTCGACCCTATCGTGCTTGCGGCA GCGATCACAGGCCGCGTGCCAGACATCGGCGGGATTGTGACTGCCTCCACCAGCTTCAGCCTGCCCTACACGCTCGCCAG GCAAATCGCCTCGGTGAACCTGCTTTCGGGCGGCCGCATCGGCTGGAACGCGGTCACAACCGCCAACCCCGCCGTCGCGG CCAACTACGGCGCCGCGATTGCCACACATGACAATCGCTATGAGCGGGCGGAAGAGTTCCTGGAGGTTGTCCATGGCCTT TGGAACAGCTGGAAATTCCCGTGGGATGAGGCGATCGGCCCCAATCCAAATCCGTTCGGCGAAGTGATGCCGATCAACCA TGAGGGGAAATATTTCAAGGTTGCGGGTCCCCTCAACGTGCCTTTGCCGCCTTACGGCCCGCCGGTGGTCGTGCAGGCAG GCGGCTCGGACCAGGGCAAAAGGCTCGCCAGCCGTTTCGGCGAGATCATCTATGCGTTCCTGGGGAGCAAGCCGGCCGGC CGGCGCTTCGTCGCCGAGGCGCGAGCGGCCGCTCGCGCGCAGGGCCGCCCCGAGGGCTCCACGCTGGTCCTGCCGAGCTT TGTGCCGCTGATCGGGTCGACCGAGGCAGAGGTCAAGCGGCTCGTCGCCGAGTACGAAGCCGGGCTCGATCCGGCCGAGC AGCGGATCGAGGCGCTGTCGAAGCAATTGGGCATTGATCTTGAAAGGATCAACGTTGACCAGGTGCTGCAGGAGAAGGAC TTCAATCTTCCGAAGGAGTCCGCCACGCCGATCGGCATCCTGAAATCCATGGTCGACGTCGCTCTCGACGAGAAGCTTTC ACTGCGGCAACTGGCTTTGCGCATGCGGCTGATTGCGGGCACGCCGGATCAGGTCGCCGACCGTCTCATCGATTGGTGGC AAGACGAGGCGGCGGATGGATTTGTGATCAATGCCCCGCTGCTACCCGACGCTCTGGAGATTTTTGTCGATCAGGTCGTA CCGATCCTGCAGTCGCGAGGCGTTTTTCCCCGCAGCTACACCGAGTCGACCTTGCGTGAGAGGTTGGGTTTGCCTCGAAA TCCGCTAGGTTGA
Upstream 100 bases:
>100_bases TCGTCTTCAATAGCGACACCCTTGCCAGCCCGATCACGCCGGTCGAACGGACCGGAATGTGGCGGCGTCTTTTTGGCGGC AGAACCCAGGAGGCCTCTTA
Downstream 100 bases:
>100_bases CCAAGCGAAAATCATGGTTTGTTCCACATCTGCATACATTTACAAATACAAAATTGTATGCTTTATTTGGGCTGTGAGTG GATGCCACCCATGCGTTTAA
Product: putative nitrilotriacetate monooxygenase component A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MRKRRMYLVSWLNSSGVLPNSWNEGRGNRARIFDLENYIRSAEIARRGRIDAFFLADQPQLTPNPKVRPEYPFDPIVLAA AITGRVPDIGGIVTASTSFSLPYTLARQIASVNLLSGGRIGWNAVTTANPAVAANYGAAIATHDNRYERAEEFLEVVHGL WNSWKFPWDEAIGPNPNPFGEVMPINHEGKYFKVAGPLNVPLPPYGPPVVVQAGGSDQGKRLASRFGEIIYAFLGSKPAG RRFVAEARAAARAQGRPEGSTLVLPSFVPLIGSTEAEVKRLVAEYEAGLDPAEQRIEALSKQLGIDLERINVDQVLQEKD FNLPKESATPIGILKSMVDVALDEKLSLRQLALRMRLIAGTPDQVADRLIDWWQDEAADGFVINAPLLPDALEIFVDQVV PILQSRGVFPRSYTESTLRERLGLPRNPLG
Sequences:
>Translated_430_residues MRKRRMYLVSWLNSSGVLPNSWNEGRGNRARIFDLENYIRSAEIARRGRIDAFFLADQPQLTPNPKVRPEYPFDPIVLAA AITGRVPDIGGIVTASTSFSLPYTLARQIASVNLLSGGRIGWNAVTTANPAVAANYGAAIATHDNRYERAEEFLEVVHGL WNSWKFPWDEAIGPNPNPFGEVMPINHEGKYFKVAGPLNVPLPPYGPPVVVQAGGSDQGKRLASRFGEIIYAFLGSKPAG RRFVAEARAAARAQGRPEGSTLVLPSFVPLIGSTEAEVKRLVAEYEAGLDPAEQRIEALSKQLGIDLERINVDQVLQEKD FNLPKESATPIGILKSMVDVALDEKLSLRQLALRMRLIAGTPDQVADRLIDWWQDEAADGFVINAPLLPDALEIFVDQVV PILQSRGVFPRSYTESTLRERLGLPRNPLG >Mature_430_residues MRKRRMYLVSWLNSSGVLPNSWNEGRGNRARIFDLENYIRSAEIARRGRIDAFFLADQPQLTPNPKVRPEYPFDPIVLAA AITGRVPDIGGIVTASTSFSLPYTLARQIASVNLLSGGRIGWNAVTTANPAVAANYGAAIATHDNRYERAEEFLEVVHGL WNSWKFPWDEAIGPNPNPFGEVMPINHEGKYFKVAGPLNVPLPPYGPPVVVQAGGSDQGKRLASRFGEIIYAFLGSKPAG RRFVAEARAAARAQGRPEGSTLVLPSFVPLIGSTEAEVKRLVAEYEAGLDPAEQRIEALSKQLGIDLERINVDQVLQEKD FNLPKESATPIGILKSMVDVALDEKLSLRQLALRMRLIAGTPDQVADRLIDWWQDEAADGFVINAPLLPDALEIFVDQVV PILQSRGVFPRSYTESTLRERLGLPRNPLG
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 47336; Mature: 47336
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRRMYLVSWLNSSGVLPNSWNEGRGNRARIFDLENYIRSAEIARRGRIDAFFLADQPQ CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCC LTPNPKVRPEYPFDPIVLAAAITGRVPDIGGIVTASTSFSLPYTLARQIASVNLLSGGRI CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCC GWNAVTTANPAVAANYGAAIATHDNRYERAEEFLEVVHGLWNSWKFPWDEAIGPNPNPFG CCCEECCCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC EVMPINHEGKYFKVAGPLNVPLPPYGPPVVVQAGGSDQGKRLASRFGEIIYAFLGSKPAG CEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC RRFVAEARAAARAQGRPEGSTLVLPSFVPLIGSTEAEVKRLVAEYEAGLDPAEQRIEALS HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH KQLGIDLERINVDQVLQEKDFNLPKESATPIGILKSMVDVALDEKLSLRQLALRMRLIAG HHHCCCHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TPDQVADRLIDWWQDEAADGFVINAPLLPDALEIFVDQVVPILQSRGVFPRSYTESTLRE CHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLGLPRNPLG HHCCCCCCCC >Mature Secondary Structure MRKRRMYLVSWLNSSGVLPNSWNEGRGNRARIFDLENYIRSAEIARRGRIDAFFLADQPQ CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCC LTPNPKVRPEYPFDPIVLAAAITGRVPDIGGIVTASTSFSLPYTLARQIASVNLLSGGRI CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHEEECCCCC GWNAVTTANPAVAANYGAAIATHDNRYERAEEFLEVVHGLWNSWKFPWDEAIGPNPNPFG CCCEECCCCCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCC EVMPINHEGKYFKVAGPLNVPLPPYGPPVVVQAGGSDQGKRLASRFGEIIYAFLGSKPAG CEEECCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC RRFVAEARAAARAQGRPEGSTLVLPSFVPLIGSTEAEVKRLVAEYEAGLDPAEQRIEALS HHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH KQLGIDLERINVDQVLQEKDFNLPKESATPIGILKSMVDVALDEKLSLRQLALRMRLIAG HHHCCCHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TPDQVADRLIDWWQDEAADGFVINAPLLPDALEIFVDQVVPILQSRGVFPRSYTESTLRE CHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLGLPRNPLG HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]