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The map label for this gene is yurR [H]

Identifier: 110634178

GI number: 110634178

Start: 1962688

End: 1963803

Strand: Reverse

Name: yurR [H]

Synonym: Meso_1828

Alternate gene names: 110634178

Gene position: 1963803-1962688 (Counterclockwise)

Preceding gene: 110634180

Following gene: 110634176

Centisome position: 44.51

GC content: 63.17

Gene sequence:

>1116_bases
ATGCGTGTGCTGATCATTGGCGCAGGAATTCTTGGAGCGAGTGCTGCCTACCACCTAGCCCGCCTCGGGGCGCAGGTGGA
AATCATCGATCAAAATCATCCGGGCAAGGCGACTTTGGCGGGCGCCGGAGTCGTCTGTCCCTGGGCAACGGAGGCGGACG
ATCCAGACTGGTATCTACTCTATGCCCGGGGCGCTCGCTATTACGGCACGCTGATCGAGGAACTCAGGGGGCAAGGTGAG
ACGGAGCTTGGCTATAGTAGGGTAGGCGCGCTCGTGCTGGCCGAAGACAGGGCACGGCTCGACACGATCGAGGGCCGGAT
TAGCCGCCGCATCAAAGATGCACCCGAAGCGGGCACTGTGCGACGGCTCGGTGCTGGCGAGGCGAAAAGGTTGTTCCCTC
CGCTGCGTGACGATCTGGAAGCAATCCACATTCCCGGCGGCGCGCGGGTCGATGGCAGGCTGCTTGCCGCGTCAATGCTG
CGCGTTGCCATTTCGTCGGGCGCGACCTTGCGGAACGATTATGTCTCCTTGCGCCTGAATGATGGACGCGCGGAATGCCT
TGGCAGCGATGGCAGGCCCATTCCCGCCGACGAAATTATCGTGACCGCCGGCGCATGGGCAGCGCAGATCCTGGCGCTGC
TCGGGCTCCGTCATCCAGTTGTGCCTCAAAAGGGGCAGATTATTCATCTGCATCTGCCGGGCGTAGCCACGAGCGGATGG
CCGGTCGTCCTGCCGATGAACAGCTACTATATGCTAGCCTTCGATGACTCGCGCGTTGTGGTCGGGGCAACGCGCGAGGA
CGGTTCAGGTTTCGATTACCGCGTGACCGCGAGAGGCCAATTGGAGGTGCTGCAGGCAGGACTTGGCATCGCACCGGGGC
TTGCTGACGCCACTCATATTGAAACGCGGGTAGGTTTTCGGCCGGCGGGCTCCGCCATGAGACCGATCCTTGGACGCGTA
CCGCAAATCGCCGGCCTCACGATCGGCAATGGTCTCGGAGCCTCAGGTTTGACGGTAGGCCCCTTTGCCGGTCATCTGCT
GGCCGGCGTGGTGATGGGCGAGCCCGCCGAGGTTCCCCTGGAGCGTTATAGCCCCACGGGGCCTGAAGCCGGCTGA

Upstream 100 bases:

>100_bases
CTGCCGAGGTTTTCCGTCGCTGGCCGTTGGAAAATCACCCCTGCCAAGTATCGTCGGCAGTATTCCTTGACTCGTCACTC
AAACATTGGTCGTGAAACGC

Downstream 100 bases:

>100_bases
CCAAGCCTTGGCGTCGTTAGTGTCCACCGTGCCTCCGAAACCGATACCGGCTTTGGGGCTAGAACCGCCTGGTGAGGACG
AAGATCGCCCCTTTGACCAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRVLIIGAGILGASAAYHLARLGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLLYARGARYYGTLIEELRGQGE
TELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTVRRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASML
RVAISSGATLRNDYVSLRLNDGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW
PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHIETRVGFRPAGSAMRPILGRV
PQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPLERYSPTGPEAG

Sequences:

>Translated_371_residues
MRVLIIGAGILGASAAYHLARLGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLLYARGARYYGTLIEELRGQGE
TELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTVRRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASML
RVAISSGATLRNDYVSLRLNDGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW
PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHIETRVGFRPAGSAMRPILGRV
PQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPLERYSPTGPEAG
>Mature_371_residues
MRVLIIGAGILGASAAYHLARLGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLLYARGARYYGTLIEELRGQGE
TELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTVRRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASML
RVAISSGATLRNDYVSLRLNDGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW
PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHIETRVGFRPAGSAMRPILGRV
PQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPLERYSPTGPEAG

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 39026; Mature: 39026

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIIGAGILGASAAYHLARLGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLL
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEECCCCCCCCCCEEEE
YARGARYYGTLIEELRGQGETELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTV
EECCCHHHHHHHHHHCCCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCE
RRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASMLRVAISSGATLRNDYVSLRLN
EECCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEEC
DGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW
CCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHI
EEEEECCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCH
ETRVGFRPAGSAMRPILGRVPQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPL
HHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCEECCHHHHHHHHHHCCCCCCCCH
ERYSPTGPEAG
HHCCCCCCCCC
>Mature Secondary Structure
MRVLIIGAGILGASAAYHLARLGAQVEIIDQNHPGKATLAGAGVVCPWATEADDPDWYLL
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEECCCCCCCCCCEEEE
YARGARYYGTLIEELRGQGETELGYSRVGALVLAEDRARLDTIEGRISRRIKDAPEAGTV
EECCCHHHHHHHHHHCCCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCE
RRLGAGEAKRLFPPLRDDLEAIHIPGGARVDGRLLAASMLRVAISSGATLRNDYVSLRLN
EECCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEEC
DGRAECLGSDGRPIPADEIIVTAGAWAAQILALLGLRHPVVPQKGQIIHLHLPGVATSGW
CCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
PVVLPMNSYYMLAFDDSRVVVGATREDGSGFDYRVTARGQLEVLQAGLGIAPGLADATHI
EEEEECCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCH
ETRVGFRPAGSAMRPILGRVPQIAGLTIGNGLGASGLTVGPFAGHLLAGVVMGEPAEVPL
HHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCEECCHHHHHHHHHHCCCCCCCCH
ERYSPTGPEAG
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]