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The map label for this gene is nagZ [H]

Identifier: 110634161

GI number: 110634161

Start: 1939185

End: 1940216

Strand: Reverse

Name: nagZ [H]

Synonym: Meso_1810

Alternate gene names: 110634161

Gene position: 1940216-1939185 (Counterclockwise)

Preceding gene: 110634163

Following gene: 110634160

Centisome position: 43.97

GC content: 63.86

Gene sequence:

>1032_bases
ATGCTTGCTCCCATGAGCGAATCAAAAGCAATGATCTTTGGCGCCGCCGGAACGCGGCTCACCCCTGAAGAGAAGGCCTT
CTACCGTGATGAGCGGCCGTGGGGATTTATCCTTTTTGCCCGCAATGTGGCGGAGGCGTCTCAGCTTCGGGATCTTGTGG
CGGAAATGCGCGAATGCGTGGCGCGCGCCGACGCACCCGTCTTTATCGATCAGGAGGGCGGCCGCGTGCAGCGGATTCGC
CCGCCTCTTGCGCCCAACTACCCCGATGCAGCGGCGCTCGGCGCGCTTTATGCGGCGGATCGCAAGGCTGGTTTGCGCGC
GACCTGGCTGATGTCGCGCCTGCACGCTTTCGATCTTGCAAGCCACGGGATTTCAGCGGACTGCCTGCCGGTGCTGGACG
TGCCCGTGCCCGGCGCTCATGATGTGATCGGCAATCGCGCCTATGGCCAAGACCCCGAGACAGTCGCGGTGCTGGGGCGC
GCGGCCGCCGACGGATTGCTGGCCGGCGGCATATTGCCGGTGATGAAGCATGTGCCGGGCCATGGCAGGGCGGGGGTGGA
CAGCCATCTGTCGCTGCCACGGGTCGACGCCTCGCTCGCGGAGTTGCGCGCGCGGGATTTCCTCCCCTTCAAGGCCCTTG
CCGACCTGCCGGTGGCGATGACCGCGCATGTGGTCTATGAGGCGGTGGATCCCGAGAACCCGTCGACCACTTCTTCGCGC
GTGATCTGCGATATCATCCGCGGTGAAATCGGCTTTAGCGGGCTGCTCATGAGCGATGACGTTTCCATGAAGGCGCTTTC
TGGGGATTTCTCAGGCCGGGCGAAGGCAATCCTTGCCGCAGGCTGCGATCTTGTCCTTCATTGCAACGGGGTGATGGAAG
AAATGCGAGCCGTTGCCCAAAGCGTGCCGGAATTGCGGGGCAAATCTGCCGAGCGCGCGGCAAAGGCGCTCGGCTGCCTC
GCTGCTCCGGACGAAATGGAAGAGGCGGCGGCGCGCGCGGAATTCAATTCGTATTTCGAAGCGATTGCCTGA

Upstream 100 bases:

>100_bases
ATGGCGCTGTTGGCAATCCCAAGGCAGGACGGAAACAATCCCGCCGGCCGGAGCGGTCAGCAATCTGGTCTCAGCCGTGC
CTTGTCACGCGGATCGGGCT

Downstream 100 bases:

>100_bases
AAGGCGAGACAAGGAACCAGTTTGGCGGACCAGGGACAAGCGACGGCAAAGACGGGAAAGCCCATCCCCATGGACAAGCT
GTGGGCCGAGGAGACAGCCG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLAPMSESKAMIFGAAGTRLTPEEKAFYRDERPWGFILFARNVAEASQLRDLVAEMRECVARADAPVFIDQEGGRVQRIR
PPLAPNYPDAAALGALYAADRKAGLRATWLMSRLHAFDLASHGISADCLPVLDVPVPGAHDVIGNRAYGQDPETVAVLGR
AAADGLLAGGILPVMKHVPGHGRAGVDSHLSLPRVDASLAELRARDFLPFKALADLPVAMTAHVVYEAVDPENPSTTSSR
VICDIIRGEIGFSGLLMSDDVSMKALSGDFSGRAKAILAAGCDLVLHCNGVMEEMRAVAQSVPELRGKSAERAAKALGCL
AAPDEMEEAAARAEFNSYFEAIA

Sequences:

>Translated_343_residues
MLAPMSESKAMIFGAAGTRLTPEEKAFYRDERPWGFILFARNVAEASQLRDLVAEMRECVARADAPVFIDQEGGRVQRIR
PPLAPNYPDAAALGALYAADRKAGLRATWLMSRLHAFDLASHGISADCLPVLDVPVPGAHDVIGNRAYGQDPETVAVLGR
AAADGLLAGGILPVMKHVPGHGRAGVDSHLSLPRVDASLAELRARDFLPFKALADLPVAMTAHVVYEAVDPENPSTTSSR
VICDIIRGEIGFSGLLMSDDVSMKALSGDFSGRAKAILAAGCDLVLHCNGVMEEMRAVAQSVPELRGKSAERAAKALGCL
AAPDEMEEAAARAEFNSYFEAIA
>Mature_343_residues
MLAPMSESKAMIFGAAGTRLTPEEKAFYRDERPWGFILFARNVAEASQLRDLVAEMRECVARADAPVFIDQEGGRVQRIR
PPLAPNYPDAAALGALYAADRKAGLRATWLMSRLHAFDLASHGISADCLPVLDVPVPGAHDVIGNRAYGQDPETVAVLGR
AAADGLLAGGILPVMKHVPGHGRAGVDSHLSLPRVDASLAELRARDFLPFKALADLPVAMTAHVVYEAVDPENPSTTSSR
VICDIIRGEIGFSGLLMSDDVSMKALSGDFSGRAKAILAAGCDLVLHCNGVMEEMRAVAQSVPELRGKSAERAAKALGCL
AAPDEMEEAAARAEFNSYFEAIA

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=281, Percent_Identity=37.0106761565836, Blast_Score=150, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 36473; Mature: 36473

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPMSESKAMIFGAAGTRLTPEEKAFYRDERPWGFILFARNVAEASQLRDLVAEMRECV
CCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
ARADAPVFIDQEGGRVQRIRPPLAPNYPDAAALGALYAADRKAGLRATWLMSRLHAFDLA
HHCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SHGISADCLPVLDVPVPGAHDVIGNRAYGQDPETVAVLGRAAADGLLAGGILPVMKHVPG
HCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HGRAGVDSHLSLPRVDASLAELRARDFLPFKALADLPVAMTAHVVYEAVDPENPSTTSSR
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
VICDIIRGEIGFSGLLMSDDVSMKALSGDFSGRAKAILAAGCDLVLHCNGVMEEMRAVAQ
HHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHH
SVPELRGKSAERAAKALGCLAAPDEMEEAAARAEFNSYFEAIA
HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAPMSESKAMIFGAAGTRLTPEEKAFYRDERPWGFILFARNVAEASQLRDLVAEMRECV
CCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
ARADAPVFIDQEGGRVQRIRPPLAPNYPDAAALGALYAADRKAGLRATWLMSRLHAFDLA
HHCCCCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SHGISADCLPVLDVPVPGAHDVIGNRAYGQDPETVAVLGRAAADGLLAGGILPVMKHVPG
HCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HGRAGVDSHLSLPRVDASLAELRARDFLPFKALADLPVAMTAHVVYEAVDPENPSTTSSR
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
VICDIIRGEIGFSGLLMSDDVSMKALSGDFSGRAKAILAAGCDLVLHCNGVMEEMRAVAQ
HHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHH
SVPELRGKSAERAAKALGCLAAPDEMEEAAARAEFNSYFEAIA
HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA