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The map label for this gene is ccdA [H]

Identifier: 110634122

GI number: 110634122

Start: 1893078

End: 1893815

Strand: Reverse

Name: ccdA [H]

Synonym: Meso_1771

Alternate gene names: 110634122

Gene position: 1893815-1893078 (Counterclockwise)

Preceding gene: 110634125

Following gene: 110634121

Centisome position: 42.92

GC content: 63.28

Gene sequence:

>738_bases
ATGGCGATCGATATCGGCTATACGAGCGCGTTTGCGGCGGGAGCGCTTTCGTTCCTGTCGCCATGCGTGCTGCCGCTCGT
GCCGCCGTATCTGTGCTATATGGCGGGCGTGACGGTGGAGGATTTTCGCCGGCCGGAAGGTGCCGCGGCGGCCAGATTGC
CGCTTTTGGCAGCGGCACTCACCTTCGTGCTCGGATTTTCAACCGTGTTCGTCGCGCTTGGCGCCGGCGCCTCCACCATT
GGAGGATTTTTGCGCGCCTGGCAACAGGAACTCGCCATTGCCGCGGGGATCGTGATCATCCTCATGGGGCTCAACTTCCT
GGGAATCCTCCGGATACCGCTCCTTTCGCGGGAAGCACGGCTTCACATGGAAGCAAAGCCGGCCAATATCGGCGCCGCCT
ATCTCATGGGGCTTGCCTTCGCCTTCGGCTGGACGCCCTGCATCGGGCCGGTGCTCGGGCCAATCCTCACGCTTGCCGGC
GGAAGGGAGACCGTGGGCGAGGGGGCCTTGATGCTCGCCGTCTACTCCGCCGGGCTCGGCATTCCCTTCATCGTGGCGGC
CTTGTTCTCGGATGCCTTCATGCGCTTCCTGCAACGCTTCCGCATGCATCTTGGCAGGGTAGAAAAGGCAATCGGCGGCC
TCTTGGTGCTTGCGGGCGTTCTGTTCCTCACGGGCGGCATGCAGAACATGGCCTTCTGGTTGCTCGAAACTTTCCCGACG
CTCGGAACGCTCGGCTGA

Upstream 100 bases:

>100_bases
CTCGGGAACGGGGGCCTGCCTGCGGCGCAATGCCACGAGATGGTGATTGGAGCTTGGCCGGCCATCCCGCTATATCGTGG
CGACCAAAGAGGTTGAGCGG

Downstream 100 bases:

>100_bases
AGCCATTTTGCGCCGGGCGCGGTGGAGTGATAGAGATCGTTCCCAATTGCCGATTCAACGGATATCTCGCATGACCAACC
GCACCTGTCTCGCCGTCATT

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAIDIGYTSAFAAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRRPEGAAAARLPLLAAALTFVLGFSTVFVALGAGASTI
GGFLRAWQQELAIAAGIVIILMGLNFLGILRIPLLSREARLHMEAKPANIGAAYLMGLAFAFGWTPCIGPVLGPILTLAG
GRETVGEGALMLAVYSAGLGIPFIVAALFSDAFMRFLQRFRMHLGRVEKAIGGLLVLAGVLFLTGGMQNMAFWLLETFPT
LGTLG

Sequences:

>Translated_245_residues
MAIDIGYTSAFAAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRRPEGAAAARLPLLAAALTFVLGFSTVFVALGAGASTI
GGFLRAWQQELAIAAGIVIILMGLNFLGILRIPLLSREARLHMEAKPANIGAAYLMGLAFAFGWTPCIGPVLGPILTLAG
GRETVGEGALMLAVYSAGLGIPFIVAALFSDAFMRFLQRFRMHLGRVEKAIGGLLVLAGVLFLTGGMQNMAFWLLETFPT
LGTLG
>Mature_244_residues
AIDIGYTSAFAAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRRPEGAAAARLPLLAAALTFVLGFSTVFVALGAGASTIG
GFLRAWQQELAIAAGIVIILMGLNFLGILRIPLLSREARLHMEAKPANIGAAYLMGLAFAFGWTPCIGPVLGPILTLAGG
RETVGEGALMLAVYSAGLGIPFIVAALFSDAFMRFLQRFRMHLGRVEKAIGGLLVLAGVLFLTGGMQNMAFWLLETFPTL
GTLG

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 25712; Mature: 25581

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCC
>Mature Secondary Structure 
AIDIGYTSAFAAGALSFLSPCVLPLVPPYLCYMAGVTVEDFRRPEGAAAARLPLLAAAL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHH
TFVLGFSTVFVALGAGASTIGGFLRAWQQELAIAAGIVIILMGLNFLGILRIPLLSREAR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHMEAKPANIGAAYLMGLAFAFGWTPCIGPVLGPILTLAGGRETVGEGALMLAVYSAGLG
HHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCC
IPFIVAALFSDAFMRFLQRFRMHLGRVEKAIGGLLVLAGVLFLTGGMQNMAFWLLETFPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LGTLG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]