| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110634073
Identifier: 110634073
GI number: 110634073
Start: 1844834
End: 1845091
Strand: Direct
Name: 110634073
Synonym: Meso_1721
Alternate gene names: NA
Gene position: 1844834-1845091 (Clockwise)
Preceding gene: 110634069
Following gene: 110634075
Centisome position: 41.81
GC content: 57.75
Gene sequence:
>258_bases ATGGACATCTCACGCGCGGAACAGCGCATTCTTCATATTTTGGCTCAAGGCGGGTGCATCCAGGTTGAAAAGGACGAGGA CGGCCGCATCGCCGAAATTTCCTGTGTCACCCGCGATGGGTGGCATTTGCCTGGCTTGGACCTCGCCCTCTTTCGCAAGG TCAAACGCAAAGGTGCGATCGCTTCGACGAACGGTGGTCCTTACCGTATCACGCGGCGGGGCCTACAGCTCGTCCGTTCG CAAACCGACAATCGTTGA
Upstream 100 bases:
>100_bases GCCCCTTCGGGCCAGGGCTGAACCTGAGCCCCGCGCTGCCTTTCAGGCTGCGCGGCGACGTGTTTTGGCGCGTGTGCGCC ACAGGTTTCCAGGATCAGAA
Downstream 100 bases:
>100_bases AGACAAACCGAGGCTGCCGTCAGGTCGGCGGCCTCTCTTCACGCCGTCGCTATATAGGTACGGATCTCCTCCGCCTCGCG TTCCACTTCCTCGATTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MDISRAEQRILHILAQGGCIQVEKDEDGRIAEISCVTRDGWHLPGLDLALFRKVKRKGAIASTNGGPYRITRRGLQLVRS QTDNR
Sequences:
>Translated_85_residues MDISRAEQRILHILAQGGCIQVEKDEDGRIAEISCVTRDGWHLPGLDLALFRKVKRKGAIASTNGGPYRITRRGLQLVRS QTDNR >Mature_85_residues MDISRAEQRILHILAQGGCIQVEKDEDGRIAEISCVTRDGWHLPGLDLALFRKVKRKGAIASTNGGPYRITRRGLQLVRS QTDNR
Specific function: Unknown
COG id: COG3811
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0386 family
Homologues:
Organism=Escherichia coli, GI87082418, Length=85, Percent_Identity=45.8823529411765, Blast_Score=69, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1721_MESSB (Q11HK9)
Other databases:
- EMBL: CP000390 - RefSeq: YP_674281.1 - STRING: Q11HK9 - GeneID: 4181351 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_1721 - NMPDR: fig|266779.1.peg.3804 - eggNOG: COG3811 - HOGENOM: HBG299141 - OMA: PYRITER - ProtClustDB: PRK13687 - BioCyc: MSP266779:MESO_1721-MONOMER - HAMAP: MF_00827 - InterPro: IPR018654
Pfam domain/function: PF09857 DUF2084
EC number: NA
Molecular weight: Translated: 9527; Mature: 9527
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISRAEQRILHILAQGGCIQVEKDEDGRIAEISCVTRDGWHLPGLDLALFRKVKRKGAI CCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCE ASTNGGPYRITRRGLQLVRSQTDNR ECCCCCCEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MDISRAEQRILHILAQGGCIQVEKDEDGRIAEISCVTRDGWHLPGLDLALFRKVKRKGAI CCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCE ASTNGGPYRITRRGLQLVRSQTDNR ECCCCCCEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA