Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is ywbO [H]

Identifier: 110634052

GI number: 110634052

Start: 1818236

End: 1818919

Strand: Direct

Name: ywbO [H]

Synonym: Meso_1700

Alternate gene names: 110634052

Gene position: 1818236-1818919 (Clockwise)

Preceding gene: 110634051

Following gene: 110634053

Centisome position: 41.21

GC content: 61.7

Gene sequence:

>684_bases
ATGAGCGACAAGCCAGCCCTCAGCGTCAATGTCGTCTCCGATGTCGTGTGTCCCTGGTGTTTCCTGGGTATGCGAAATCT
CCAGCTTGCGCTGGCCGATCTCAGGGATATCGACGTCATGGTGCGCTGGCGCCCCTATCAACTCGATCCTACGATCCCGT
CGGAAGGCCTCGACCGCAAAGCCTACATGGTCCAGAAATTCGGCAGCCTGGAACGCATCGAGGCGGCGCATGATCGCCTG
CGCGAGATGGGAACGGCTGCCGGCATTTCCTACCACTTCGCAGCCATTAAGGTCGCACCCAATACGCTTGACGCGCATCG
GGTGATCCGCTGGGCTGCGACGGCAGGCGAAGACGTGCAGAACAGGCTCGTGGAGCGCCTGTTCCGCCTCTATTTCGAAG
AGGGACAGAACATCGGCGATCATGCCGTGCTGATCGAGGCCGCGCGGCAGGCGGACATGGACGCCTCGTTGGTCGAAACG
CTGCTGCCCACCCAGGCGGACCGCGATGAGGTGAAGGCGGAGGTGGAGACGGCCCAGCGCATGGGCATCACCGGTGTCCC
CTGTTTTTTGCTCGAGGGCCGATATGCGTTGATGGGGGCTCAGCCACCTAGAGCGCTCTCGGACGCGATCACGAAGGTGA
GCGAGGCAAAGGAAAAGGGCGAGTTGGAGAACCCACAGGAATAG

Upstream 100 bases:

>100_bases
GTGGATCGCCTATTGGAATTATCTGGAGCATCCGGAAGTATCGCCCCTGAATGGTTACGACCTCTCCACCTGGTGGCGCA
AACCGAAATAGGAACACGTG

Downstream 100 bases:

>100_bases
TTCACCGCGGGGGCAGCGGAAAATGAGCGATATCAGCAATGTGACATTGCGGGTTATGAAGGCGCGCGTGCCGGATACGG
CTCGCGATATCGTCCGGATC

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRL
REMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVET
LLPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE

Sequences:

>Translated_227_residues
MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRL
REMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVET
LLPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE
>Mature_226_residues
SDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRKAYMVQKFGSLERIEAAHDRLR
EMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQNRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETL
LPTQADRDEVKAEVETAQRMGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 25293; Mature: 25162

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRK
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCHH
AYMVQKFGSLERIEAAHDRLREMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQ
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHH
NRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETLLPTQADRDEVKAEVETAQR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
MGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE
CCCCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDKPALSVNVVSDVVCPWCFLGMRNLQLALADLRDIDVMVRWRPYQLDPTIPSEGLDRK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEECCCCCCCCCCCHH
AYMVQKFGSLERIEAAHDRLREMGTAAGISYHFAAIKVAPNTLDAHRVIRWAATAGEDVQ
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCHHHH
NRLVERLFRLYFEEGQNIGDHAVLIEAARQADMDASLVETLLPTQADRDEVKAEVETAQR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
MGITGVPCFLLEGRYALMGAQPPRALSDAITKVSEAKEKGELENPQE
CCCCCCCHHEECCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]