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The map label for this gene is yufP [H]

Identifier: 110634044

GI number: 110634044

Start: 1808993

End: 1810096

Strand: Reverse

Name: yufP [H]

Synonym: Meso_1692

Alternate gene names: 110634044

Gene position: 1810096-1808993 (Counterclockwise)

Preceding gene: 110634045

Following gene: 110634043

Centisome position: 41.02

GC content: 60.6

Gene sequence:

>1104_bases
ATGCGCATCGAGCTCGTAAAAAGGCCACAGCAGTCAGTTCTCTTCAGCGTGCTTTCGCCATTTATCGCGCTGGCGCTCAC
CTTGATCGCTGGGGCACTGCTGTTCCTTCTCCTCGGCAAGGATCCAGTCAACACGCTCTACGTCTTCTTTATCGAGCCGC
TGCGAGAGACCTGGTCTCTGCACGAGCTCGCGGTGAAGGCCGCGCCCCTGATTCTCATCGCAATCGGCCTTTCCGTGTGC
TTTCTTTCCAACAACTGGAATATCGGCGCTGAGGGGCAGTTCATCATCGGCGCAATGGCGGGATCGATCCTGCCGGTGAT
GTTTCCGGACTTCCAATCCTGGATCGTCCTGCCTCTGATGCTTCTCATGGGCATCGCCGGCGGAGCGGCCTATGCGGCAG
TTCCGGCCGTTCTCAAGGTTCGGTTCAACACCAACGAGATCCTGACCAGCCTGATGCTGGTCTATGTGGCCCAGCTTTTC
CTCGATTGGATGGTTCGCGGACCCTGGCGCAATCCGGAAGGCTTCAACTTTCCCGAAACGCGCAGCTTTCACGAATATGC
CATTCTGCCGGAAATCTGGTCCGCCTCGGGCCGGGCGCACTGGGGCTTCATCTTCGGGCTGGTGGCCGCGCTGGCATTGT
GGTTCATGATGACGAAGACGTTGAGGGGCTTCGAAATAAAAGTGCTCGGCCAAAGCCCCCGTGCAGGCCGCTTCGCCGGC
TTCTCTCAAGGGCGCATTGTTTTCTTCGCTTTTCTTTTGTCCGGTGCGCTCGCGGGTCTTGCCGGCCTTTCGGAGGTTTC
CGGTGCGATCGGGCAATTGAGGCCCGTCATCTCCCCGGGCTACGGGTTCACCGCGATCATCGTCGCCTTCCTGGGCCGGC
TCAATCCGCTCGGCGTCGTAGCCGCAGGGCTGGTGCTGGCGCTCACATATCTCGGCGGGGAGGCGGCGCAGATCTCGGTC
GGCCTTTCGGACAAAGTGGTGCGCGTCTTCCAGGGCATGATCCTGTTCTTTGTGCTGGCGGGGGACACGTTCATCCATTA
CCGGATCCGCTTCGTCTCAGCGCCCGCAGCAGCGGCCGGGGAGGCCTCGCGCGCAAATGTTTGA

Upstream 100 bases:

>100_bases
CACCCATTCCAATCGGCGACGCCACCTATGAGAAGATCGGTTTGCTCATGGGCGGCGCGGAGCCGGGCCATGCCGCTGTT
TCGCAGGCGGAGGCCGTCTG

Downstream 100 bases:

>100_bases
AGCGATCCTGATCACAATCGCCACCGCTGCGACGCCGCTTTTGCTGGCTTCAATGGGCGAGCTCGTCGTCGAGCGTTCGG
GCGTGCTCAATCTTGGTGTA

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRIELVKRPQQSVLFSVLSPFIALALTLIAGALLFLLLGKDPVNTLYVFFIEPLRETWSLHELAVKAAPLILIAIGLSVC
FLSNNWNIGAEGQFIIGAMAGSILPVMFPDFQSWIVLPLMLLMGIAGGAAYAAVPAVLKVRFNTNEILTSLMLVYVAQLF
LDWMVRGPWRNPEGFNFPETRSFHEYAILPEIWSASGRAHWGFIFGLVAALALWFMMTKTLRGFEIKVLGQSPRAGRFAG
FSQGRIVFFAFLLSGALAGLAGLSEVSGAIGQLRPVISPGYGFTAIIVAFLGRLNPLGVVAAGLVLALTYLGGEAAQISV
GLSDKVVRVFQGMILFFVLAGDTFIHYRIRFVSAPAAAAGEASRANV

Sequences:

>Translated_367_residues
MRIELVKRPQQSVLFSVLSPFIALALTLIAGALLFLLLGKDPVNTLYVFFIEPLRETWSLHELAVKAAPLILIAIGLSVC
FLSNNWNIGAEGQFIIGAMAGSILPVMFPDFQSWIVLPLMLLMGIAGGAAYAAVPAVLKVRFNTNEILTSLMLVYVAQLF
LDWMVRGPWRNPEGFNFPETRSFHEYAILPEIWSASGRAHWGFIFGLVAALALWFMMTKTLRGFEIKVLGQSPRAGRFAG
FSQGRIVFFAFLLSGALAGLAGLSEVSGAIGQLRPVISPGYGFTAIIVAFLGRLNPLGVVAAGLVLALTYLGGEAAQISV
GLSDKVVRVFQGMILFFVLAGDTFIHYRIRFVSAPAAAAGEASRANV
>Mature_367_residues
MRIELVKRPQQSVLFSVLSPFIALALTLIAGALLFLLLGKDPVNTLYVFFIEPLRETWSLHELAVKAAPLILIAIGLSVC
FLSNNWNIGAEGQFIIGAMAGSILPVMFPDFQSWIVLPLMLLMGIAGGAAYAAVPAVLKVRFNTNEILTSLMLVYVAQLF
LDWMVRGPWRNPEGFNFPETRSFHEYAILPEIWSASGRAHWGFIFGLVAALALWFMMTKTLRGFEIKVLGQSPRAGRFAG
FSQGRIVFFAFLLSGALAGLAGLSEVSGAIGQLRPVISPGYGFTAIIVAFLGRLNPLGVVAAGLVLALTYLGGEAAQISV
GLSDKVVRVFQGMILFFVLAGDTFIHYRIRFVSAPAAAAGEASRANV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39656; Mature: 39656

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIELVKRPQQSVLFSVLSPFIALALTLIAGALLFLLLGKDPVNTLYVFFIEPLRETWSL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHH
HELAVKAAPLILIAIGLSVCFLSNNWNIGAEGQFIIGAMAGSILPVMFPDFQSWIVLPLM
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHHCHHHHHCCCHHHHHHHHHH
LLMGIAGGAAYAAVPAVLKVRFNTNEILTSLMLVYVAQLFLDWMVRGPWRNPEGFNFPET
HHHHCCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RSFHEYAILPEIWSASGRAHWGFIFGLVAALALWFMMTKTLRGFEIKVLGQSPRAGRFAG
CCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
FSQGRIVFFAFLLSGALAGLAGLSEVSGAIGQLRPVISPGYGFTAIIVAFLGRLNPLGVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH
AAGLVLALTYLGGEAAQISVGLSDKVVRVFQGMILFFVLAGDTFIHYRIRFVSAPAAAAG
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHCC
EASRANV
CCCCCCC
>Mature Secondary Structure
MRIELVKRPQQSVLFSVLSPFIALALTLIAGALLFLLLGKDPVNTLYVFFIEPLRETWSL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHH
HELAVKAAPLILIAIGLSVCFLSNNWNIGAEGQFIIGAMAGSILPVMFPDFQSWIVLPLM
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHHCHHHHHCCCHHHHHHHHHH
LLMGIAGGAAYAAVPAVLKVRFNTNEILTSLMLVYVAQLFLDWMVRGPWRNPEGFNFPET
HHHHCCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RSFHEYAILPEIWSASGRAHWGFIFGLVAALALWFMMTKTLRGFEIKVLGQSPRAGRFAG
CCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
FSQGRIVFFAFLLSGALAGLAGLSEVSGAIGQLRPVISPGYGFTAIIVAFLGRLNPLGVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHH
AAGLVLALTYLGGEAAQISVGLSDKVVRVFQGMILFFVLAGDTFIHYRIRFVSAPAAAAG
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHCC
EASRANV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]