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The map label for this gene is med [H]

Identifier: 110634042

GI number: 110634042

Start: 1806973

End: 1808040

Strand: Reverse

Name: med [H]

Synonym: Meso_1690

Alternate gene names: 110634042

Gene position: 1808040-1806973 (Counterclockwise)

Preceding gene: 110634043

Following gene: 110634041

Centisome position: 40.98

GC content: 61.52

Gene sequence:

>1068_bases
ATGAAAAGAATACTGGCAGCCCTGGCGGCTTCCGCGGTGCTCGCGGTTCCAGGTGCAGCATTGGCGCAGGACAAGGTCAA
GGCGTGCTTCGTCTATGTGGGCCCCAAAACCGACGGCGGTTGGACCGAGGCGCATGACAAAGGTCGTCTTTTTGTGGAGG
AGCAACTCGGCGACAAGGTCGAGACGGCTTTTGTGGAGAATGTCGCCGAAGGTCCGGACGCCCAGCGCGCCATCGAGCGC
TTCGCCCGCGCGGACTGCGATATCGTCTTCACCACCTCATTCGGCTTCATGGACGCCACGCTGGCGGTCGCCAAGAGGTT
CCCGGATGTGAAGTTCGAGCACGCCACCGGCTACAAGACCGCCGAAAACATGGCGACCTACAACTCACGTTTTTATGAGG
GCCGCTATATCCAGGGCGTTATCGCCGGGCATATGTCGGAGAAGGGGGAGGCGGGCTATGTCGCTTCCTTCCCAATTCCG
GAAGTGGTGATGGGCATCAACGCCTTCATGCTGGGTGCCCAGTCAGTCAATCCGGACTTCAAGCTGAAAGTGGTGTGGGC
CAACACCTGGCACGACGCGGCCCGGGAGGCGGATGCCGCCAAGGCGCTGATCGACCAGGGCGTCGATATCATCACTCAGC
ACACCGACTCGACCGCGCCCGTGCAGGTGGCGGCCGAGCGTGGCATCAAGGCCTTCGGCCAGGCGTCCGACATGATCGCT
TTCGGACCCGAGACGCAGCTCACCGCCATTGTGGACACCTGGGGCGCCTATTACGTCAAGCGCATCCAGGCGGTGATCGA
CGGCACCTGGGAACCGGGCGCAATCTGGGAAGGACTGAAAGAGGGCATCTTGACCATGGCGCCCTACACCAACATGCCGG
ACGATGTGAAAGCGACTGCCGAAGAGACCGAAGCGAAAATCAAATCCGGCGAGCTTCACCCGTTCACAGGCCCCGTCAAC
AGGCAGGACGGAACGCCTTGGCTTGCTGAGGGCGAAGTCGCGGACGACGCCACGCTGCTCGGCATGAACTTCTACGTGGA
AGGAATCGACGACAAGCTGCCGAACTGA

Upstream 100 bases:

>100_bases
GACGATGATGAACACACCGGCTTCACTGGGGCGGCCGTTCGTTCCGGATCGCTAGCAAAGGCGGATAGGCCCCAGGGCAA
ACTGAAAGAGGACAACGGCA

Downstream 100 bases:

>100_bases
AGCGGACGTTCAGTCACCATAACGAAGGGCGGCTTCGAAGCCGCCCTTTTCCTTGCCAAGGCCCTCCTGACAGCAGGATG
TCAGGAGCATCCTGATATGG

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKRILAALAASAVLAVPGAALAQDKVKACFVYVGPKTDGGWTEAHDKGRLFVEEQLGDKVETAFVENVAEGPDAQRAIER
FARADCDIVFTTSFGFMDATLAVAKRFPDVKFEHATGYKTAENMATYNSRFYEGRYIQGVIAGHMSEKGEAGYVASFPIP
EVVMGINAFMLGAQSVNPDFKLKVVWANTWHDAAREADAAKALIDQGVDIITQHTDSTAPVQVAAERGIKAFGQASDMIA
FGPETQLTAIVDTWGAYYVKRIQAVIDGTWEPGAIWEGLKEGILTMAPYTNMPDDVKATAEETEAKIKSGELHPFTGPVN
RQDGTPWLAEGEVADDATLLGMNFYVEGIDDKLPN

Sequences:

>Translated_355_residues
MKRILAALAASAVLAVPGAALAQDKVKACFVYVGPKTDGGWTEAHDKGRLFVEEQLGDKVETAFVENVAEGPDAQRAIER
FARADCDIVFTTSFGFMDATLAVAKRFPDVKFEHATGYKTAENMATYNSRFYEGRYIQGVIAGHMSEKGEAGYVASFPIP
EVVMGINAFMLGAQSVNPDFKLKVVWANTWHDAAREADAAKALIDQGVDIITQHTDSTAPVQVAAERGIKAFGQASDMIA
FGPETQLTAIVDTWGAYYVKRIQAVIDGTWEPGAIWEGLKEGILTMAPYTNMPDDVKATAEETEAKIKSGELHPFTGPVN
RQDGTPWLAEGEVADDATLLGMNFYVEGIDDKLPN
>Mature_355_residues
MKRILAALAASAVLAVPGAALAQDKVKACFVYVGPKTDGGWTEAHDKGRLFVEEQLGDKVETAFVENVAEGPDAQRAIER
FARADCDIVFTTSFGFMDATLAVAKRFPDVKFEHATGYKTAENMATYNSRFYEGRYIQGVIAGHMSEKGEAGYVASFPIP
EVVMGINAFMLGAQSVNPDFKLKVVWANTWHDAAREADAAKALIDQGVDIITQHTDSTAPVQVAAERGIKAFGQASDMIA
FGPETQLTAIVDTWGAYYVKRIQAVIDGTWEPGAIWEGLKEGILTMAPYTNMPDDVKATAEETEAKIKSGELHPFTGPVN
RQDGTPWLAEGEVADDATLLGMNFYVEGIDDKLPN

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38438; Mature: 38438

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILAALAASAVLAVPGAALAQDKVKACFVYVGPKTDGGWTEAHDKGRLFVEEQLGDKV
CHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHCCCHH
ETAFVENVAEGPDAQRAIERFARADCDIVFTTSFGFMDATLAVAKRFPDVKFEHATGYKT
HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCH
AENMATYNSRFYEGRYIQGVIAGHMSEKGEAGYVASFPIPEVVMGINAFMLGAQSVNPDF
HHHHHHHCCHHCCCCEEEHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCE
KLKVVWANTWHDAAREADAAKALIDQGVDIITQHTDSTAPVQVAAERGIKAFGQASDMIA
EEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCHHHHCCCCCEEE
FGPETQLTAIVDTWGAYYVKRIQAVIDGTWEPGAIWEGLKEGILTMAPYTNMPDDVKATA
ECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHH
EETEAKIKSGELHPFTGPVNRQDGTPWLAEGEVADDATLLGMNFYVEGIDDKLPN
HHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKRILAALAASAVLAVPGAALAQDKVKACFVYVGPKTDGGWTEAHDKGRLFVEEQLGDKV
CHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHCCCHH
ETAFVENVAEGPDAQRAIERFARADCDIVFTTSFGFMDATLAVAKRFPDVKFEHATGYKT
HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCH
AENMATYNSRFYEGRYIQGVIAGHMSEKGEAGYVASFPIPEVVMGINAFMLGAQSVNPDF
HHHHHHHCCHHCCCCEEEHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHEEECCCCCCCE
KLKVVWANTWHDAAREADAAKALIDQGVDIITQHTDSTAPVQVAAERGIKAFGQASDMIA
EEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCHHHHCCCCCEEE
FGPETQLTAIVDTWGAYYVKRIQAVIDGTWEPGAIWEGLKEGILTMAPYTNMPDDVKATA
ECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHH
EETEAKIKSGELHPFTGPVNRQDGTPWLAEGEVADDATLLGMNFYVEGIDDKLPN
HHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]