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The map label for this gene is exoR [H]

Identifier: 110634039

GI number: 110634039

Start: 1803398

End: 1804204

Strand: Reverse

Name: exoR [H]

Synonym: Meso_1687

Alternate gene names: 110634039

Gene position: 1804204-1803398 (Counterclockwise)

Preceding gene: 110634040

Following gene: 110634037

Centisome position: 40.89

GC content: 62.7

Gene sequence:

>807_bases
ATGCGGATATCTGAGCAAATCATAGGCCGGCTCATCGCCGGGGCCCTCCTGTTGTTCGGGGCGCTCGGTCCCGCGGCTGC
GCTTGACGAGAAGGCCGTCGTGCAGCAGCCCTCGCGCAATCCCCTTGCCGTGTTTCGCTTCGGCTTTTCGGCCTACAAGC
GCGGAGAGAAGCAGGAAGCGGTCGAGGCCTATCGCTATGCTGCCGAAAACGGGCAGGTGGGCGCACGCTGGAAACTCGCC
CGCATGTATGCGGAAGGTGACGGCGTAGCGCGCAACGATTACGAGGCGTTCAAGTTCTTTTCAGCGGTCGCTCAACAGGA
CGTGCAGCCTGGAAGCCGCGAGGAAAGCTATGTCTCGGATGCGCTGGTGGCGGTGGGCAATTATCTGCGGCGCGGCATAC
CCGGCTCACCGGTTGCCGCCAATCCCACAATCGCGCTTGAATACTACATGCGGGCGGCCGCCACCTATCGCAATGCGGAT
GCGCAATTCCAGCTCGGCCGTATGTTCCTCTCCGGCGAGGGCGGTGCGAAAAGCGTGCAGCAGGCAGCCCGTTGGCTGCA
GCTAGCGGCTGAAAAGGGTCATGTGGGAGCACAGGCCACGCTTGGCAATCTCCTCTTCCAGAGCGGCAAGGTGGTGCGGG
GGCTGGCTTTGATGACCACGGCGCTGGACACTGCGCAGAAGCGGGCACCTGCCGATATCGCCTGGATTCGCGCGATGCAG
GAGGAAGCTTTTGCACTTGCGGGCGAATCGGATCGCCGCACCGCAATTGCGCTTGCTCAAGACTACTTGGCGAACGGGCT
AGAGTAG

Upstream 100 bases:

>100_bases
GAATATCGGTCCGGCGCGATCTGGAAATACGCGCAGGGCGTGGGCCCGGCGCGGTATGGCGCGGTGACGCATCCCGGCGC
CCAGAAAGAAACGCACTGCT

Downstream 100 bases:

>100_bases
GCAGCCACCGGCTTCTCGAAGCAATTCTAGGCCGCGATTCGCAGGTCCACCACCACCGGAACGTGGTCCGACGGCTTTTC
CCATGCGCGCGTGTGCTTCT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRISEQIIGRLIAGALLLFGALGPAAALDEKAVVQQPSRNPLAVFRFGFSAYKRGEKQEAVEAYRYAAENGQVGARWKLA
RMYAEGDGVARNDYEAFKFFSAVAQQDVQPGSREESYVSDALVAVGNYLRRGIPGSPVAANPTIALEYYMRAAATYRNAD
AQFQLGRMFLSGEGGAKSVQQAARWLQLAAEKGHVGAQATLGNLLFQSGKVVRGLALMTTALDTAQKRAPADIAWIRAMQ
EEAFALAGESDRRTAIALAQDYLANGLE

Sequences:

>Translated_268_residues
MRISEQIIGRLIAGALLLFGALGPAAALDEKAVVQQPSRNPLAVFRFGFSAYKRGEKQEAVEAYRYAAENGQVGARWKLA
RMYAEGDGVARNDYEAFKFFSAVAQQDVQPGSREESYVSDALVAVGNYLRRGIPGSPVAANPTIALEYYMRAAATYRNAD
AQFQLGRMFLSGEGGAKSVQQAARWLQLAAEKGHVGAQATLGNLLFQSGKVVRGLALMTTALDTAQKRAPADIAWIRAMQ
EEAFALAGESDRRTAIALAQDYLANGLE
>Mature_268_residues
MRISEQIIGRLIAGALLLFGALGPAAALDEKAVVQQPSRNPLAVFRFGFSAYKRGEKQEAVEAYRYAAENGQVGARWKLA
RMYAEGDGVARNDYEAFKFFSAVAQQDVQPGSREESYVSDALVAVGNYLRRGIPGSPVAANPTIALEYYMRAAATYRNAD
AQFQLGRMFLSGEGGAKSVQQAARWLQLAAEKGHVGAQATLGNLLFQSGKVVRGLALMTTALDTAQKRAPADIAWIRAMQ
EEAFALAGESDRRTAIALAQDYLANGLE

Specific function: Negatively modulates exopolysaccharide (EPS) biosynthesis [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28928; Mature: 28928

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISEQIIGRLIAGALLLFGALGPAAALDEKAVVQQPSRNPLAVFRFGFSAYKRGEKQEA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCCCCEEEECCHHHHHCCCHHHH
VEAYRYAAENGQVGARWKLARMYAEGDGVARNDYEAFKFFSAVAQQDVQPGSREESYVSD
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALVAVGNYLRRGIPGSPVAANPTIALEYYMRAAATYRNADAQFQLGRMFLSGEGGAKSVQ
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHEEECCCCCHHHHH
QAARWLQLAAEKGHVGAQATLGNLLFQSGKVVRGLALMTTALDTAQKRAPADIAWIRAMQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EEAFALAGESDRRTAIALAQDYLANGLE
HHHHHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRISEQIIGRLIAGALLLFGALGPAAALDEKAVVQQPSRNPLAVFRFGFSAYKRGEKQEA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCCCCEEEECCHHHHHCCCHHHH
VEAYRYAAENGQVGARWKLARMYAEGDGVARNDYEAFKFFSAVAQQDVQPGSREESYVSD
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALVAVGNYLRRGIPGSPVAANPTIALEYYMRAAATYRNADAQFQLGRMFLSGEGGAKSVQ
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHEEECCCCCHHHHH
QAARWLQLAAEKGHVGAQATLGNLLFQSGKVVRGLALMTTALDTAQKRAPADIAWIRAMQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EEAFALAGESDRRTAIALAQDYLANGLE
HHHHHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1711027; 11481430 [H]