| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is trkA [H]
Identifier: 110633967
GI number: 110633967
Start: 1738433
End: 1739809
Strand: Reverse
Name: trkA [H]
Synonym: Meso_1615
Alternate gene names: 110633967
Gene position: 1739809-1738433 (Counterclockwise)
Preceding gene: 110633968
Following gene: 110633966
Centisome position: 39.43
GC content: 60.57
Gene sequence:
>1377_bases ATGAAAGTCATCATTTGCGGCGCGGGCCAAGTGGGCTATGGGATTGCCGAGCGCCTTGCGGCCGAGCAGAACGATGTCTC CATCATCGATACCTCGCCGGATCTTGTCCGCTCCGTACGGGACACGCTGGACGTGCGCGGCTTCGTCGGCCATGGCGCCC ATCCCGATATTCTGGCGGCCGCGGGCGCTCAGCAGGCGGACATGATTATTGCCGTGACCCTCTTTGACGAGGTGAACATG GTCGCGTGCGAGGTCGCGCACGCGCTCTTCAATGTGCCGACGAAGATCGCCCGCATCCGTTCGCAGGCCTATCTTCAATC GCACTACATGGATCTTTTCTCGCGAGAGAACCTGCCGATCGACGTCATCATCTCCCCGGAGCTGGAGGTGGGCGAGATGG TATTGAGGCGTATCGCCCTGCCGGGTGCAACGGACGTGGTCTCCTTCGCCGAGGGGCATGTGGCGATGGTTGCAATCGAG TGCCTCGAGGAATGCCCGGTTATCAACACACCGCTTTCGCAGCTAACGGAGCTGTTTCCGGATCTGCCATCCACCGTCGT TGGCATCTCTCGCGGGGGGCACCTCTTCGTTCCCCGCTCGATCGATCAGCTGATGGCGGGTGATCTGGCCTATGTGGTCA CCACCAAGGATCAGGTGCGGCGAACGCTCGGCCTTTTCGGTCACGATGAGAAGGAGGCAACGCGCATTGTAATTGCCGGT GGCGGAAATATCGGCCTTTATGTTGCTCGTGCGCTCGAGCAGAAGCAGAGCCGGACCAAAGTGAAGCTGATCGAGAGCAA TCATGCCCGGGCGGTGACCGTCGCCGACCAGCTGCGTCGCACTGTCGTGCTGAATGGCAGCGCTCTCGAACAAAAGCTGC TGCTCGAAGCCGATATCGACCATGCCGACCTGATGGTCGCGCTGACGAACGACGATCAGGTGAACATTCTCTGCAGCGTG ATTGCGAAGCGGCTGGGATGCCGGTCCAATCTTGTCCTGATCAACAACCCTACATATCACGACTTCGCGCGGACGCTTGG CATCGATGCCCATGTGAACCCTCGGGCGGTGACGATCTCACGCGTGTTGCAGCATGTGCGGCGTGGACGCATCCGGGCCG TCCACAATATCGATCGTGGAGCTGCGGAGGTGCTGGAGGCCGAGGCACTCGAGACATCGCCGCTTGTCGGGCCGCCGCTC AACGAACAGGAACTGCCTGACGGGATGCGCATCGGCGGCGTTTATCGCGACGGCCAATTCATCAGGCCAAGCGGATCGCT GCGGATAAAGCCCAAGGACCGCGTCGTCATCTTTGCGCTTGCCGATGCCGTAAGGCAGGTGGAGCAGCTGTTCCGCGTCA GTTTGGAATTCTTTTGA
Upstream 100 bases:
>100_bases CGGCAATATTTCTCGTACTGCCGAATTCATAGGGATGGAGCGTTCGGCGCTGCACAGGAAACTGAAGTCGCTGGGCGTCT GACGGCCCTCGGAGAATGGA
Downstream 100 bases:
>100_bases TCATCGGCTGTCTTTAAGGAGTCTGGAATGCCGCGCATCGCCTATGTGAATGGCCGCTATGTTCATCATGCGGACGCCGC CGTTCACATTGAAGACCGGG
Product: potassium transporter peripheral membrane component
Products: NA
Alternate protein names: K(+)-uptake protein trkA [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF
Sequences:
>Translated_458_residues MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF >Mature_458_residues MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAAAGAQQADMIIAVTLFDEVNM VACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPIDVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIE CLEECPVINTPLSQLTELFPDLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADIDHADLMVALTNDDQVNILCSV IAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTISRVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPL NEQELPDGMRIGGVYRDGQFIRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF
Specific function: Part of a potassium transport system [H]
COG id: COG0569
COG function: function code P; K+ transport systems, NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK N-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1789685, Length=463, Percent_Identity=41.036717062635, Blast_Score=325, Evalue=4e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 50034; Mature: 50034
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAA CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEECCCCCCCHHHH AGAQQADMIIAVTLFDEVNMVACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPI CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE DVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIECLEECPVINTPLSQLTELFP EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC DLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG CCCCHHEEECCCCEEEECCCHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEE GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADID CCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHCCEEEECCCHHHHHHHHCCCCC HADLMVALTNDDQVNILCSVIAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTIS CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEHHH RVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPLNEQELPDGMRIGGVYRDGQF HHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECCEEECCEE IRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF ECCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVIICGAGQVGYGIAERLAAEQNDVSIIDTSPDLVRSVRDTLDVRGFVGHGAHPDILAA CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCEEECCCCCCCHHHH AGAQQADMIIAVTLFDEVNMVACEVAHALFNVPTKIARIRSQAYLQSHYMDLFSRENLPI CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE DVIISPELEVGEMVLRRIALPGATDVVSFAEGHVAMVAIECLEECPVINTPLSQLTELFP EEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC DLPSTVVGISRGGHLFVPRSIDQLMAGDLAYVVTTKDQVRRTLGLFGHDEKEATRIVIAG CCCCHHEEECCCCEEEECCCHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEEE GGNIGLYVARALEQKQSRTKVKLIESNHARAVTVADQLRRTVVLNGSALEQKLLLEADID CCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHCCEEEECCCHHHHHHHHCCCCC HADLMVALTNDDQVNILCSVIAKRLGCRSNLVLINNPTYHDFARTLGIDAHVNPRAVTIS CCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEHHH RVLQHVRRGRIRAVHNIDRGAAEVLEAEALETSPLVGPPLNEQELPDGMRIGGVYRDGQF HHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEECCEEECCEE IRPSGSLRIKPKDRVVIFALADAVRQVEQLFRVSLEFF ECCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1661370 [H]