Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110633955

Identifier: 110633955

GI number: 110633955

Start: 1726012

End: 1727142

Strand: Direct

Name: 110633955

Synonym: Meso_1603

Alternate gene names: NA

Gene position: 1726012-1727142 (Clockwise)

Preceding gene: 110633954

Following gene: 110633956

Centisome position: 39.12

GC content: 59.24

Gene sequence:

>1131_bases
ATGAAGATATTAGGCCGAGATATTCCGCTCGACGAGATAACGTCACATGTCGGAGCATTCAGCCAGGTGTTCGGCGTCGA
ATTGGTAACGCAGGAAAACGGTCTGCAGCGAGGCAACCGCGTCCTTATCTTCCGCTCCGGTTCAGGCTTGATGTTTGAGG
TGCAGGTTGACCGGGCAATGGACCTCAGCCGCATGAACTATCTTGGCGTACCGATCGGCTGGGATTCGCCAGCGGACTTG
CGAAGTCCGTGGCTGCATGAGTTCGATGCCGAAGATGGTTTCAGCTGGGCCCGCTCCTTCTCCGGTCTCATGAACTCATG
TGGGCTCGACCACATCCACGCTCCAGAAACGGACAGCGCAGCACATTTCAATCATCCGCCGCGGCCCGAGATTACGTTCC
CACTTCACTCGCGCATCAGCTACACCCCTGCGCTTCTCACTGGCTACGGCGTGCGTTGGGAAGGAGAGAGGGCGTTCCTC
TACGCGAGCGGCGAAGTGCGGCAGGCAACCGTGTTCGGCGAAAACTTCCTCCTCGCAAGACGCATTGAAGTGGAGGTTGG
CACTAATTGCGTGATCTATACCGATACCGTCCGGAACCTATCCTACAACACCGTGCCGCATGCCTATCTTTGGCACATCA
ACCTGGGCTGGCCGCTCTTGAATGCAGGGTCGAGGCTGGTCAGCCCGATTTCTGAAACGCCGTGGTCGCTCCGAGCAGGC
GAAGACAACGAGAGCGGAGCGTTCGAACAAGCCGGTCCTCGTCACCCGACCACCCAGCAGGTTTTCGACCACCACGTCCG
CCTTGAGGCTGACGGCACGGCGCGCGCGGCGCTGATCAATGACGACTTCCAGCATCCGTGTGGCTCCACAGGGCTTGCGC
TGGAAATCGCCTATGACGGACGCGCGATGCCGGCGCTGTTCCAATGGCAGTTCTTCCAATCAGGCAATTACGTCATGGCC
ATTGAGCCATCCACGACCCATGCCGGCTCCAGGGCTGACTGGCACGCCCGCAAGGAATTCAAGATGCTGGGCCACGGCGA
GAGCGCAAGCTACAGACTGGAACTGACGCCGCACATCGGTGCCACGGCAATTACGGAGGCTGAACAGCGCATTATGAACC
CGGTGACGTGA

Upstream 100 bases:

>100_bases
CTTTAAGGATCACCTGCCGGCCAACGGTAGCAGATGGTATTGCGCACCTCAAATGCTTGGCTCAAACCTGGAAGGCCGAT
CAGCAGAGGTGAGGGTAGCC

Downstream 100 bases:

>100_bases
TGATTACAATGTGACTGTGCGCTTTTCAAAATCCTGGCGAGCCCGTATTAGTTGCCGAGTGCAGCGTGCACGGTATTTGC
CGGTTCCTGGAGGATCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKILGRDIPLDEITSHVGAFSQVFGVELVTQENGLQRGNRVLIFRSGSGLMFEVQVDRAMDLSRMNYLGVPIGWDSPADL
RSPWLHEFDAEDGFSWARSFSGLMNSCGLDHIHAPETDSAAHFNHPPRPEITFPLHSRISYTPALLTGYGVRWEGERAFL
YASGEVRQATVFGENFLLARRIEVEVGTNCVIYTDTVRNLSYNTVPHAYLWHINLGWPLLNAGSRLVSPISETPWSLRAG
EDNESGAFEQAGPRHPTTQQVFDHHVRLEADGTARAALINDDFQHPCGSTGLALEIAYDGRAMPALFQWQFFQSGNYVMA
IEPSTTHAGSRADWHARKEFKMLGHGESASYRLELTPHIGATAITEAEQRIMNPVT

Sequences:

>Translated_376_residues
MKILGRDIPLDEITSHVGAFSQVFGVELVTQENGLQRGNRVLIFRSGSGLMFEVQVDRAMDLSRMNYLGVPIGWDSPADL
RSPWLHEFDAEDGFSWARSFSGLMNSCGLDHIHAPETDSAAHFNHPPRPEITFPLHSRISYTPALLTGYGVRWEGERAFL
YASGEVRQATVFGENFLLARRIEVEVGTNCVIYTDTVRNLSYNTVPHAYLWHINLGWPLLNAGSRLVSPISETPWSLRAG
EDNESGAFEQAGPRHPTTQQVFDHHVRLEADGTARAALINDDFQHPCGSTGLALEIAYDGRAMPALFQWQFFQSGNYVMA
IEPSTTHAGSRADWHARKEFKMLGHGESASYRLELTPHIGATAITEAEQRIMNPVT
>Mature_376_residues
MKILGRDIPLDEITSHVGAFSQVFGVELVTQENGLQRGNRVLIFRSGSGLMFEVQVDRAMDLSRMNYLGVPIGWDSPADL
RSPWLHEFDAEDGFSWARSFSGLMNSCGLDHIHAPETDSAAHFNHPPRPEITFPLHSRISYTPALLTGYGVRWEGERAFL
YASGEVRQATVFGENFLLARRIEVEVGTNCVIYTDTVRNLSYNTVPHAYLWHINLGWPLLNAGSRLVSPISETPWSLRAG
EDNESGAFEQAGPRHPTTQQVFDHHVRLEADGTARAALINDDFQHPCGSTGLALEIAYDGRAMPALFQWQFFQSGNYVMA
IEPSTTHAGSRADWHARKEFKMLGHGESASYRLELTPHIGATAITEAEQRIMNPVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41905; Mature: 41905

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILGRDIPLDEITSHVGAFSQVFGVELVTQENGLQRGNRVLIFRSGSGLMFEVQVDRAM
CCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCC
DLSRMNYLGVPIGWDSPADLRSPWLHEFDAEDGFSWARSFSGLMNSCGLDHIHAPETDSA
CHHHCCEEEEECCCCCCHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
AHFNHPPRPEITFPLHSRISYTPALLTGYGVRWEGERAFLYASGEVRQATVFGENFLLAR
CCCCCCCCCCEEECHHCCCCCCCHHHCCCCEEECCCEEEEEECCCEEEEEEECCCEEEEE
RIEVEVGTNCVIYTDTVRNLSYNTVPHAYLWHINLGWPLLNAGSRLVSPISETPWSLRAG
EEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCCHHHCCHHCCCCEEECC
EDNESGAFEQAGPRHPTTQQVFDHHVRLEADGTARAALINDDFQHPCGSTGLALEIAYDG
CCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECC
RAMPALFQWQFFQSGNYVMAIEPSTTHAGSRADWHARKEFKMLGHGESASYRLELTPHIG
CCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCC
ATAITEAEQRIMNPVT
CHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILGRDIPLDEITSHVGAFSQVFGVELVTQENGLQRGNRVLIFRSGSGLMFEVQVDRAM
CCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCC
DLSRMNYLGVPIGWDSPADLRSPWLHEFDAEDGFSWARSFSGLMNSCGLDHIHAPETDSA
CHHHCCEEEEECCCCCCHHHCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
AHFNHPPRPEITFPLHSRISYTPALLTGYGVRWEGERAFLYASGEVRQATVFGENFLLAR
CCCCCCCCCCEEECHHCCCCCCCHHHCCCCEEECCCEEEEEECCCEEEEEEECCCEEEEE
RIEVEVGTNCVIYTDTVRNLSYNTVPHAYLWHINLGWPLLNAGSRLVSPISETPWSLRAG
EEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEECCCCHHHCCHHCCCCEEECC
EDNESGAFEQAGPRHPTTQQVFDHHVRLEADGTARAALINDDFQHPCGSTGLALEIAYDG
CCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECC
RAMPALFQWQFFQSGNYVMAIEPSTTHAGSRADWHARKEFKMLGHGESASYRLELTPHIG
CCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCEEEEEECCCCC
ATAITEAEQRIMNPVT
CHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA