| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110633954
Identifier: 110633954
GI number: 110633954
Start: 1725529
End: 1725762
Strand: Direct
Name: 110633954
Synonym: Meso_1602
Alternate gene names: NA
Gene position: 1725529-1725762 (Clockwise)
Preceding gene: 110633953
Following gene: 110633955
Centisome position: 39.11
GC content: 55.98
Gene sequence:
>234_bases ATGGATGTCCTGATAAACGCGGCCAATATTCTATATGTGATCGCCTACTTCACCATGGATCTGCTGCGCCTGCGCGTCCT CACCCTGACGGCAGCAGGCTGCCTTGCTGTCTATTTTTACAGCCAGCCCGTTCCGATGCTGAACGCGGTCGCCTGGAACG TGTTCTTCATAGTCCTGAACCTGGTTCACATTACTCGCATTTTGCTGGCGCGGTGCCGGAGCGCCCGACTGTAG
Upstream 100 bases:
>100_bases TCTCGAAACCTTCAAGGCTGAATTCGGCGGCGAATGACGTCGGCGCCCGGCACCCTTTTGCCGGGCGCTGCCTCTAGCCA CAGATATTGGAAGTGCTCCC
Downstream 100 bases:
>100_bases CGGCGCTTTTCGCGGAAGCGGCCGCAAACAGGCGAAGCTGGCCTTCAAAGCGTTCCCAAACAGACGATCTCGGGAGCCAG CAGCAAGCAACGGGCTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MDVLINAANILYVIAYFTMDLLRLRVLTLTAAGCLAVYFYSQPVPMLNAVAWNVFFIVLNLVHITRILLARCRSARL
Sequences:
>Translated_77_residues MDVLINAANILYVIAYFTMDLLRLRVLTLTAAGCLAVYFYSQPVPMLNAVAWNVFFIVLNLVHITRILLARCRSARL >Mature_77_residues MDVLINAANILYVIAYFTMDLLRLRVLTLTAAGCLAVYFYSQPVPMLNAVAWNVFFIVLNLVHITRILLARCRSARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8745; Mature: 8745
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLINAANILYVIAYFTMDLLRLRVLTLTAAGCLAVYFYSQPVPMLNAVAWNVFFIVLN CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LVHITRILLARCRSARL HHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVLINAANILYVIAYFTMDLLRLRVLTLTAAGCLAVYFYSQPVPMLNAVAWNVFFIVLN CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LVHITRILLARCRSARL HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA