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The map label for this gene is 110633939

Identifier: 110633939

GI number: 110633939

Start: 1708843

End: 1709859

Strand: Direct

Name: 110633939

Synonym: Meso_1587

Alternate gene names: NA

Gene position: 1708843-1709859 (Clockwise)

Preceding gene: 110633938

Following gene: 110633940

Centisome position: 38.73

GC content: 62.64

Gene sequence:

>1017_bases
ATGCGCTGGAAGCGAACACTTCAGACGGTCGACGTCCATTGTGAAGGCGAAATCGGCCGGGTGATCACCGGCGGCGTGCT
CGACATTCCGGGCGCGACCATGGCCGCCAAGCTCAACCACTTCAACACGGTCGATGACAGCTTGCGGCGCTTCCTGTGTT
CGGAGCCGCGCAGCGGCCCGGCCGGATCTTTCGTGCTGCTGACCCCAGCCACGCGGCCGGAGGCTGATTTCGGCTTCATC
GTTCTTCAGCCCGACCAGGCACACGCCATGTCCGGCTCCAATGCCATGTGCGCCGTGACCGCCGTTCTGGAGACCGGCAT
GAAGGAAATGGCCGAGCCGCAGACGATCGTCACGCTCGACACGGCCGCAGGTCTCGTGCGTGCGGTCGCGACCTGCGAAA
GGGGCAAGGTCATCCGCGTCACCCTCGATATGCCGCCTTCCTTTGTCGTGCAGAAGGATGTCGTGATCGAAACGCCGCAA
TGGGGGCCGGTCCGATACGACTTGTGCTTCGGCGGCGTCTTCTACGCCTTGGTCGATGCGGACCAGCTAAAGCTTGAGAT
AGCTCCGCATAATGCACGCGAGCTGGCGGTGAGCGGCGTTGCCCTGCGCGATCTCATCACGCGCGAGGTCAGTGTTGCTC
ACCCTGAAACACCGGAAATCAACGGCATTGCCTATCTCATGTTCCGCGCGCAAGAGGCCGACGGCGCCATCCGCACCTGT
ACGACGCTGCCTCCGGGGCGCGTCGACCGGTCTCCCTGCGGCACTGGGTCGAATGCCAATATGGCGGTACGTTACCACGA
AGGGCGCGTGAGACCGGGAGACAAGGTGGTATCCCGTTCCACGATTGGCGGTGAGTTCACCACGCTTTTCGTCGAAGAGA
CGCGCGTGGGACCGTATGTCGCCACGCGAAACCGTGTTTCCGGCCAGAGCTGGATTTACGGCATTTCGCAGATTGGCCTT
GATCCCGACGATCCCTTCCCGTTTGGGTTCATCGTCTCGGATACCTGGGGCGGTTGA

Upstream 100 bases:

>100_bases
CGAGCTCGGCGAATGGGAATTGAACAACGACCTCGAAACCAAGCAGATCACGACCTACAATCTCCGAAGCCCCGGGACTG
AGACATCAAAGGCTAATCTC

Downstream 100 bases:

>100_bases
TCTGAGGCTGCGATTTATTGGCGCTGGCGTTATTGCCGAGGCGCTTGTCACCGGCCTCCTGCTTGCAGACCTTCCGGCGA
CGGAATTCATTATGTCCGAG

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MRWKRTLQTVDVHCEGEIGRVITGGVLDIPGATMAAKLNHFNTVDDSLRRFLCSEPRSGPAGSFVLLTPATRPEADFGFI
VLQPDQAHAMSGSNAMCAVTAVLETGMKEMAEPQTIVTLDTAAGLVRAVATCERGKVIRVTLDMPPSFVVQKDVVIETPQ
WGPVRYDLCFGGVFYALVDADQLKLEIAPHNARELAVSGVALRDLITREVSVAHPETPEINGIAYLMFRAQEADGAIRTC
TTLPPGRVDRSPCGTGSNANMAVRYHEGRVRPGDKVVSRSTIGGEFTTLFVEETRVGPYVATRNRVSGQSWIYGISQIGL
DPDDPFPFGFIVSDTWGG

Sequences:

>Translated_338_residues
MRWKRTLQTVDVHCEGEIGRVITGGVLDIPGATMAAKLNHFNTVDDSLRRFLCSEPRSGPAGSFVLLTPATRPEADFGFI
VLQPDQAHAMSGSNAMCAVTAVLETGMKEMAEPQTIVTLDTAAGLVRAVATCERGKVIRVTLDMPPSFVVQKDVVIETPQ
WGPVRYDLCFGGVFYALVDADQLKLEIAPHNARELAVSGVALRDLITREVSVAHPETPEINGIAYLMFRAQEADGAIRTC
TTLPPGRVDRSPCGTGSNANMAVRYHEGRVRPGDKVVSRSTIGGEFTTLFVEETRVGPYVATRNRVSGQSWIYGISQIGL
DPDDPFPFGFIVSDTWGG
>Mature_338_residues
MRWKRTLQTVDVHCEGEIGRVITGGVLDIPGATMAAKLNHFNTVDDSLRRFLCSEPRSGPAGSFVLLTPATRPEADFGFI
VLQPDQAHAMSGSNAMCAVTAVLETGMKEMAEPQTIVTLDTAAGLVRAVATCERGKVIRVTLDMPPSFVVQKDVVIETPQ
WGPVRYDLCFGGVFYALVDADQLKLEIAPHNARELAVSGVALRDLITREVSVAHPETPEINGIAYLMFRAQEADGAIRTC
TTLPPGRVDRSPCGTGSNANMAVRYHEGRVRPGDKVVSRSTIGGEFTTLFVEETRVGPYVATRNRVSGQSWIYGISQIGL
DPDDPFPFGFIVSDTWGG

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=337, Percent_Identity=28.7833827893175, Blast_Score=137, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36580; Mature: 36580

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWKRTLQTVDVHCEGEIGRVITGGVLDIPGATMAAKLNHFNTVDDSLRRFLCSEPRSGP
CCCHHCEEEEEEEECCCCCEEEECCEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCC
AGSFVLLTPATRPEADFGFIVLQPDQAHAMSGSNAMCAVTAVLETGMKEMAEPQTIVTLD
CCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEH
TAAGLVRAVATCERGKVIRVTLDMPPSFVVQKDVVIETPQWGPVRYDLCFGGVFYALVDA
HHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEECCCCCCEEEEEEHHHEEEEEECC
DQLKLEIAPHNARELAVSGVALRDLITREVSVAHPETPEINGIAYLMFRAQEADGAIRTC
CCEEEEECCCCCHHHEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEE
TTLPPGRVDRSPCGTGSNANMAVRYHEGRVRPGDKVVSRSTIGGEFTTLFVEETRVGPYV
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEECCCCCCCEEEEEEEECCCCCEE
ATRNRVSGQSWIYGISQIGLDPDDPFPFGFIVSDTWGG
EECCCCCCCCEEEEHHHCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MRWKRTLQTVDVHCEGEIGRVITGGVLDIPGATMAAKLNHFNTVDDSLRRFLCSEPRSGP
CCCHHCEEEEEEEECCCCCEEEECCEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCC
AGSFVLLTPATRPEADFGFIVLQPDQAHAMSGSNAMCAVTAVLETGMKEMAEPQTIVTLD
CCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEH
TAAGLVRAVATCERGKVIRVTLDMPPSFVVQKDVVIETPQWGPVRYDLCFGGVFYALVDA
HHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEECCCCCCEEEEEEHHHEEEEEECC
DQLKLEIAPHNARELAVSGVALRDLITREVSVAHPETPEINGIAYLMFRAQEADGAIRTC
CCEEEEECCCCCHHHEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEE
TTLPPGRVDRSPCGTGSNANMAVRYHEGRVRPGDKVVSRSTIGGEFTTLFVEETRVGPYV
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEECCCCCCCEEEEEEEECCCCCEE
ATRNRVSGQSWIYGISQIGLDPDDPFPFGFIVSDTWGG
EECCCCCCCCEEEEHHHCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]