| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is hisJ [H]
Identifier: 110633915
GI number: 110633915
Start: 1680576
End: 1681361
Strand: Direct
Name: hisJ [H]
Synonym: Meso_1562
Alternate gene names: 110633915
Gene position: 1680576-1681361 (Clockwise)
Preceding gene: 110633914
Following gene: 110633916
Centisome position: 38.09
GC content: 56.62
Gene sequence:
>786_bases ATGCGTATCACCGGACGTATTGCACTCATTCTTTCCGCCGCGCTCGTGGCACTGTCGGCCAGCGCCTCCCAAGCCCAGGA AAGGATGCAGCTAAAAATCGGAACCGAGGGCGCCTACCCACCCTTCAATAATCTCACCGCCGATGGAAACCTCGAAGGGT TTGATATCGATATCGCCCGCGCGCTCTGCGAGGAGATGAATGCGGAATGCGAATTCGTCACGCAGGAGTGGGATGGCATG ATCCCCGCGCTTCAGGCAGGCAAATTCGACGCCATCATCGCTTCTATGTCGATCACTGACGAACGCAAGCAGCAGGTCGA CTTTACAGAGAAATATTACAACACGCCGCCGGCTATCGTCGTGGCGAAAGATTCTGATATCGCCGGCGTGACGAAGGAAG ATCTCGCTGGCAGGACGATCGGCGCCCAAGCGTCCACGACGCATGGCAATTTTGCCGAGGCGACTTTCCAGGAAAGCGAG GTCAAGCTCTATCCGACCGCCGAGGAATACAAGCTCGACATGACGAACGGGCGTCTGGACGCTGTGGTCGATGACGTAAT CGTCCTGCAGGACTGGCTAAGCACGCCCGATGGGGAGTGCTGTAAGGTGCTGGGCACGCTCACGCCTGTCGAGGAAATCT ACGGCGAGGGAATCGGCATAGCCATCCGCAAGGGCGAGGATGAGCTGCGCGAGAAATTCAACGCCGCTATCCAAGCCATC CGCGAAAACGGAAAATACAAGGAAATCAATGACAAGTACTTCGAGTTCGACGTTTACGGCGGTTAG
Upstream 100 bases:
>100_bases CTTACTCTTTCCCGTTGCATTTCCTTCCGAAAGAATGGGAATATCAGCTCCAAAGCGGGCGCCTGAGAAGGTGACCGGAA CAAGAACAGTGAGGGAGATG
Downstream 100 bases:
>100_bases GCTGCCGCGGGCGGGAGAAATCCCGTCGCTTTACCTGCGCAAGCCGACGCAGTTCAACACGCGGGTTCCCGCTGAAGAAG CCAACTGGCGTCGTTGGCAT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-histidine [Cytoplasm] [C]
Alternate protein names: HBP [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRITGRIALILSAALVALSASASQAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEMNAECEFVTQEWDGM IPALQAGKFDAIIASMSITDERKQQVDFTEKYYNTPPAIVVAKDSDIAGVTKEDLAGRTIGAQASTTHGNFAEATFQESE VKLYPTAEEYKLDMTNGRLDAVVDDVIVLQDWLSTPDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI RENGKYKEINDKYFEFDVYGG
Sequences:
>Translated_261_residues MRITGRIALILSAALVALSASASQAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEMNAECEFVTQEWDGM IPALQAGKFDAIIASMSITDERKQQVDFTEKYYNTPPAIVVAKDSDIAGVTKEDLAGRTIGAQASTTHGNFAEATFQESE VKLYPTAEEYKLDMTNGRLDAVVDDVIVLQDWLSTPDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI RENGKYKEINDKYFEFDVYGG >Mature_261_residues MRITGRIALILSAALVALSASASQAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIARALCEEMNAECEFVTQEWDGM IPALQAGKFDAIIASMSITDERKQQVDFTEKYYNTPPAIVVAKDSDIAGVTKEDLAGRTIGAQASTTHGNFAEATFQESE VKLYPTAEEYKLDMTNGRLDAVVDDVIVLQDWLSTPDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI RENGKYKEINDKYFEFDVYGG
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=39.7435897435897, Blast_Score=174, Evalue=6e-45, Organism=Escherichia coli, GI1787085, Length=246, Percent_Identity=36.1788617886179, Blast_Score=172, Evalue=1e-44, Organism=Escherichia coli, GI1787088, Length=249, Percent_Identity=36.144578313253, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1788649, Length=250, Percent_Identity=35.6, Blast_Score=163, Evalue=1e-41, Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=31.3253012048193, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=29.5454545454545, Blast_Score=121, Evalue=4e-29,
Paralogues:
None
Copy number: 3400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28616; Mature: 28616
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITGRIALILSAALVALSASASQAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIAR CCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH ALCEEMNAECEFVTQEWDGMIPALQAGKFDAIIASMSITDERKQQVDFTEKYYNTPPAIV HHHHHCCCCEEEEEHHHCCCCCHHCCCCHHHEEEEECCCHHHHHHCCHHHHHCCCCCEEE VAKDSDIAGVTKEDLAGRTIGAQASTTHGNFAEATFQESEVKLYPTAEEYKLDMTNGRLD EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECHHHEEEECCCCCHH AVVDDVIVLQDWLSTPDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH RENGKYKEINDKYFEFDVYGG HHCCCEEECCCCEEEEEECCC >Mature Secondary Structure MRITGRIALILSAALVALSASASQAQERMQLKIGTEGAYPPFNNLTADGNLEGFDIDIAR CCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH ALCEEMNAECEFVTQEWDGMIPALQAGKFDAIIASMSITDERKQQVDFTEKYYNTPPAIV HHHHHCCCCEEEEEHHHCCCCCHHCCCCHHHEEEEECCCHHHHHHCCHHHHHCCCCCEEE VAKDSDIAGVTKEDLAGRTIGAQASTTHGNFAEATFQESEVKLYPTAEEYKLDMTNGRLD EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECHHHEEEECCCCCHH AVVDDVIVLQDWLSTPDGECCKVLGTLTPVEEIYGEGIGIAIRKGEDELREKFNAAIQAI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH RENGKYKEINDKYFEFDVYGG HHCCCEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]