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The map label for this gene is yrbE [C]

Identifier: 110633893

GI number: 110633893

Start: 1658410

End: 1659597

Strand: Direct

Name: yrbE [C]

Synonym: Meso_1540

Alternate gene names: 110633893

Gene position: 1658410-1659597 (Clockwise)

Preceding gene: 110633891

Following gene: 110633894

Centisome position: 37.58

GC content: 61.53

Gene sequence:

>1188_bases
ATGGTCTTCAGCATTATGACCCGGAGAAACGGAACTGCCCAGGAGCGCGATCCAACCGCGCCGGACCTGGAATTGCGCGA
GGAAAACGGCGCGCTTGTCTGCCGGCTGTCAGGCAATTGGACCACGCGCACCGTGAGCCTCGTCGATGATCCCATGCGCA
GGCTGCGCGCTCGCAAGGGTCTGACGCATTTCATCATCGATCTCGGAGATGTTGGGCATCTCGACACTGCCGGCGCATGG
TTGGTGTCGCGACTCGCCGCTGCCCAGAAGGAGAATGGAGCGCAGGTCGAGATAAGCGGCCAGTCGGAGGCTGCCTCCAT
CCTGCTTGCGGCGATCGAGCCTACCGCGCAAGAGCCGGACGTGCCGAAGGATGGGCGGCGGGGCAATCTGATCGTCAACA
TCCTGGCAGCCATGGGCCGCACCATCTACGACATCAAGGATGATGTGCTCTACGGGATGCACATTCTGGGAGCCACGATC
AGCGGCGCACAGATGAAGCTCGGGCGCGGCCATGCCGTAAATCCCGCGGCCATCGCCAACCAGATCGACCGCATGGGCGT
TGGCTCGATTCCCATCATCGTGCTGATGTCGGCGGTCGTGGGCGCGATTATCGCGCAGCAGGGCGCCTTCCAGCTGCGGT
GGTTCGGCGCTGAAATTTACGTTGTGGACCTCGTCGGAATCCTGATTCTGCGCGAACTCGGCGTGCTGCTCACGGCAATC
ATGATCGCCGGCCGTTCGGGCAGCGCCATCACCGCCGAGATCGGATCCATGAAGATGCGCGAGGAGGTGGACGCACTGAC
CGTTATCGGGCTTAACCCGGTCGGAGTGCTGGTCTTTCCTCGCCTCGTCGCGCTCGTAGTGGCGGTACCCTGCCTCACGA
TCGTCGCCAATTTCTCCGCCCTCGGCGGCGCCATTCTGGTGGCTTGGCTCTATTCCGACATTATGCCCGCCACCTTCATC
CAGCGCCTCCACGATGCGATCGACCTGACGAGCATCTTCGCCGGCTTGATCAAGGCCCCCTTCATGGCCCTCATCATCGG
CATCATCGCTTCAGTGGAAGGCATGAAGGTGGGCGGCAGCGCGGAATCGCTTGGCAAGCATGTGACCGCCTCCGTCGTGA
AAACGATTTTCCTCGTCATCGTTATCGATGGCCTTTTCGCCATGTTCTACGCAGCGATCGACTTCTAA

Upstream 100 bases:

>100_bases
CTCACACGGTCGAGGGAGGGGCGGTTCATTTCATTCTATACATTGCTTTCATGGGTAAAGACGTTTTCTTCTTGGTTCCT
CCGCTTTAAGGATTCTCCCC

Downstream 100 bases:

>100_bases
AATGGCAGGGGTAACTCACGAAGGCGAAGCCCATCAAACTCCTTTGCAAGGAGAAGGCAATTCGAATCAAGCCGTGCATG
GTTCCGACGTGGTGCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVFSIMTRRNGTAQERDPTAPDLELREENGALVCRLSGNWTTRTVSLVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAW
LVSRLAAAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDIKDDVLYGMHILGATI
SGAQMKLGRGHAVNPAAIANQIDRMGVGSIPIIVLMSAVVGAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAI
MIAGRSGSAITAEIGSMKMREEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFI
QRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVIDGLFAMFYAAIDF

Sequences:

>Translated_395_residues
MVFSIMTRRNGTAQERDPTAPDLELREENGALVCRLSGNWTTRTVSLVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAW
LVSRLAAAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDIKDDVLYGMHILGATI
SGAQMKLGRGHAVNPAAIANQIDRMGVGSIPIIVLMSAVVGAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAI
MIAGRSGSAITAEIGSMKMREEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFI
QRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVIDGLFAMFYAAIDF
>Mature_395_residues
MVFSIMTRRNGTAQERDPTAPDLELREENGALVCRLSGNWTTRTVSLVDDPMRRLRARKGLTHFIIDLGDVGHLDTAGAW
LVSRLAAAQKENGAQVEISGQSEAASILLAAIEPTAQEPDVPKDGRRGNLIVNILAAMGRTIYDIKDDVLYGMHILGATI
SGAQMKLGRGHAVNPAAIANQIDRMGVGSIPIIVLMSAVVGAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAI
MIAGRSGSAITAEIGSMKMREEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSALGGAILVAWLYSDIMPATFI
QRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGSAESLGKHVTASVVKTIFLVIVIDGLFAMFYAAIDF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=256, Percent_Identity=27.34375, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41946; Mature: 41946

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSIMTRRNGTAQERDPTAPDLELREENGALVCRLSGNWTTRTVSLVDDPMRRLRARKG
CEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCC
LTHFIIDLGDVGHLDTAGAWLVSRLAAAQKENGAQVEISGQSEAASILLAAIEPTAQEPD
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHEEHEEECCCCCCCC
VPKDGRRGNLIVNILAAMGRTIYDIKDDVLYGMHILGATISGAQMKLGRGHAVNPAAIAN
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHH
QIDRMGVGSIPIIVLMSAVVGAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAI
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
MIAGRSGSAITAEIGSMKMREEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSA
HHCCCCCCEEEEHHHCHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGAILVAWLYSDIMPATFIQRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AESLGKHVTASVVKTIFLVIVIDGLFAMFYAAIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFSIMTRRNGTAQERDPTAPDLELREENGALVCRLSGNWTTRTVSLVDDPMRRLRARKG
CEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCC
LTHFIIDLGDVGHLDTAGAWLVSRLAAAQKENGAQVEISGQSEAASILLAAIEPTAQEPD
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHEEHEEECCCCCCCC
VPKDGRRGNLIVNILAAMGRTIYDIKDDVLYGMHILGATISGAQMKLGRGHAVNPAAIAN
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHH
QIDRMGVGSIPIIVLMSAVVGAIIAQQGAFQLRWFGAEIYVVDLVGILILRELGVLLTAI
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
MIAGRSGSAITAEIGSMKMREEVDALTVIGLNPVGVLVFPRLVALVVAVPCLTIVANFSA
HHCCCCCCEEEEHHHCHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGAILVAWLYSDIMPATFIQRLHDAIDLTSIFAGLIKAPFMALIIGIIASVEGMKVGGS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AESLGKHVTASVVKTIFLVIVIDGLFAMFYAAIDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA