| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is fabG [H]
Identifier: 110633890
GI number: 110633890
Start: 1655492
End: 1656271
Strand: Reverse
Name: fabG [H]
Synonym: Meso_1537
Alternate gene names: 110633890
Gene position: 1656271-1655492 (Counterclockwise)
Preceding gene: 110633892
Following gene: 110633889
Centisome position: 37.54
GC content: 61.54
Gene sequence:
>780_bases ATGGATTTGGGTATCGCCGGGAAGAACGCTATCGTATGCGCATCAAGCCGGGGGCTCGGCCGCGGTTGCGCCATGGCTCT GGCGGAAGCAGGCTGCAATCTGGTCGTCAACGGCCGCGACCCACAGAAGCTGCAGGAGACGGCGGAGGAAATTCGGGATC GGTTCGGCGTTTCGGTGACTGCGGTTGCGGCGGATGTCTCGACTCACGAGGGCCAGAAGGCGCTGCTCTCCGCATGTCCT GCGCCGGACATTCTCGTCAACAACAATGCCGGTCCGCCGCTCAAGGATTTTAGGGCGCTCACGCGGGAGGAACTCCTCAA AGGCGTGACGCAGAACATGGTTACCCCGCTGGAGCTGATCCAAGCCACCGTGACGGGAATGACCGAGCGGGGCTTCGGGC GCATCGTCAACATCACCTCGCTTTCGGTTTACATGCCGATTGCCGGCCTTGATCTCTCCTCCGGCGCGCGGGCTGGCCTT ACCGCCTTTCTTGCTGGCGTTGCGCGCAACGTGGCGGGAAAAGGGGTGACGATCAACAATCTTCTGCCGGGAAAATTCGG AACCGACCGACTCCACAGCAATATCAAGAATGCTGCCGAAAAAGCCGGCCGCTCATTTGAGGAACAGGCAGAAAAGCAGG CTTCGGAGGTGCCCGCCGGCCGCTTCGGCACGCCGGAGGAGTTCGGGCAGGTCTGTGCCTTTTTGTGTTCCGTCCATGCT GGCTATCTGACCGGCCAGAATATCCGGCTCGATGGCGGCCTCTTCCCCAGCGCATTCTGA
Upstream 100 bases:
>100_bases TTGCGCTCCCTATGCCCCGATTCATGTCACAGGGATGTGACGGTTGCCATGCCGGATTCGCGGGAGTAGACGATCAGGGA AAGCGAAAAGGGATGAGCTG
Downstream 100 bases:
>100_bases TCAAACAAGCTGGCGCGTTCGCGGCCAATCACTGTTTCGGAGAGACATTTGAAACGCTTGCGTTTTAGGAATAAGGGCGC GAAAAAGCCGGCAGTTCTTC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MDLGIAGKNAIVCASSRGLGRGCAMALAEAGCNLVVNGRDPQKLQETAEEIRDRFGVSVTAVAADVSTHEGQKALLSACP APDILVNNNAGPPLKDFRALTREELLKGVTQNMVTPLELIQATVTGMTERGFGRIVNITSLSVYMPIAGLDLSSGARAGL TAFLAGVARNVAGKGVTINNLLPGKFGTDRLHSNIKNAAEKAGRSFEEQAEKQASEVPAGRFGTPEEFGQVCAFLCSVHA GYLTGQNIRLDGGLFPSAF
Sequences:
>Translated_259_residues MDLGIAGKNAIVCASSRGLGRGCAMALAEAGCNLVVNGRDPQKLQETAEEIRDRFGVSVTAVAADVSTHEGQKALLSACP APDILVNNNAGPPLKDFRALTREELLKGVTQNMVTPLELIQATVTGMTERGFGRIVNITSLSVYMPIAGLDLSSGARAGL TAFLAGVARNVAGKGVTINNLLPGKFGTDRLHSNIKNAAEKAGRSFEEQAEKQASEVPAGRFGTPEEFGQVCAFLCSVHA GYLTGQNIRLDGGLFPSAF >Mature_259_residues MDLGIAGKNAIVCASSRGLGRGCAMALAEAGCNLVVNGRDPQKLQETAEEIRDRFGVSVTAVAADVSTHEGQKALLSACP APDILVNNNAGPPLKDFRALTREELLKGVTQNMVTPLELIQATVTGMTERGFGRIVNITSLSVYMPIAGLDLSSGARAGL TAFLAGVARNVAGKGVTINNLLPGKFGTDRLHSNIKNAAEKAGRSFEEQAEKQASEVPAGRFGTPEEFGQVCAFLCSVHA GYLTGQNIRLDGGLFPSAF
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=27.5590551181102, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=26.5384615384615, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI226371731, Length=187, Percent_Identity=28.8770053475936, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=23.046875, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI7705855, Length=183, Percent_Identity=25.6830601092896, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=25.7692307692308, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=24.124513618677, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI4503301, Length=236, Percent_Identity=25.8474576271186, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=29.1338582677165, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082160, Length=262, Percent_Identity=26.3358778625954, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=26.0700389105058, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=27.4509803921569, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=28.0632411067194, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787905, Length=263, Percent_Identity=26.2357414448669, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=28.4046692607004, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=22.568093385214, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=25, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=26.0869565217391, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=27.6, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=30.3030303030303, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=32.183908045977, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560150, Length=278, Percent_Identity=30.5755395683453, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=31.6981132075472, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=29.9625468164794, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=28.957528957529, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=27.4725274725275, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=31.8007662835249, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562906, Length=275, Percent_Identity=28.3636363636364, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=28.0898876404494, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=30.2238805970149, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=30.1158301158301, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=28.5185185185185, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17531453, Length=279, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=30.0751879699248, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=26.4822134387352, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=23.3201581027668, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994600, Length=255, Percent_Identity=27.0588235294118, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17536025, Length=273, Percent_Identity=29.3040293040293, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536651, Length=265, Percent_Identity=27.5471698113208, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=28.6274509803922, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=29.3650793650794, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24639444, Length=263, Percent_Identity=27.3764258555133, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=28.740157480315, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=25.8823529411765, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27058; Mature: 27058
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGIAGKNAIVCASSRGLGRGCAMALAEAGCNLVVNGRDPQKLQETAEEIRDRFGVSVT CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCEEE AVAADVSTHEGQKALLSACPAPDILVNNNAGPPLKDFRALTREELLKGVTQNMVTPLELI EEEECCHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH QATVTGMTERGFGRIVNITSLSVYMPIAGLDLSSGARAGLTAFLAGVARNVAGKGVTINN HHHHHHHHHCCCCEEEEEEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC LLPGKFGTDRLHSNIKNAAEKAGRSFEEQAEKQASEVPAGRFGTPEEFGQVCAFLCSVHA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GYLTGQNIRLDGGLFPSAF HHCCCCCEEECCCCCCCCC >Mature Secondary Structure MDLGIAGKNAIVCASSRGLGRGCAMALAEAGCNLVVNGRDPQKLQETAEEIRDRFGVSVT CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCEEE AVAADVSTHEGQKALLSACPAPDILVNNNAGPPLKDFRALTREELLKGVTQNMVTPLELI EEEECCHHCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH QATVTGMTERGFGRIVNITSLSVYMPIAGLDLSSGARAGLTAFLAGVARNVAGKGVTINN HHHHHHHHHCCCCEEEEEEEEEEEECEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC LLPGKFGTDRLHSNIKNAAEKAGRSFEEQAEKQASEVPAGRFGTPEEFGQVCAFLCSVHA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GYLTGQNIRLDGGLFPSAF HHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]