| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633851
Identifier: 110633851
GI number: 110633851
Start: 1594463
End: 1595575
Strand: Direct
Name: 110633851
Synonym: Meso_1498
Alternate gene names: NA
Gene position: 1594463-1595575 (Clockwise)
Preceding gene: 110633849
Following gene: 110633852
Centisome position: 36.14
GC content: 59.84
Gene sequence:
>1113_bases ATGTCCGTCCGGATAGCCACCTTCAACGTCGAAAACCTGATGAACCGGTTCGATTTTTCCGGTTTCCGCAATCAGTTGCA CCAGGACCGGACGCTGGCGATGTTCGAGATCAAGGACGAAGAGGAGTACCGCGAGTTGGAGCGGGCGCGGACGATCGCGC ATACCGACGATACCCGCCAGCTCACGGCTCTGGCGATCGCTGCGACGCGCGCCGACATTCTCTGCCTGCAGGAGGTGGAT AATCAGGCCGCTCTCAACGCCTTCGAATACGGTTATCTCCACAAGATGATCGGCGCGGGCTATCGCGAAAAATACTCCTC GGCCGGAAACGACGCGCGCGGCATCGATGTGGCGATCATGATGCGGCGCCAAACGGCTGATGGTGAGCCGATCGAATTCC GGCGCATGACCACCCATGCCCACATCACCTTCGACGATTTCAACCTCTACACGCCGGAACTGGCCGAACTCGGCCTTGGC CCCAATGAGCGGATTTTTCGCCGCGATTGCCTGGAGGTGGATGTTCTTGTCGGCGGAAAGCCTCTCACGATTTACATCGT GCATTTCAAGGCGATGAATTCGGTGCGCAATGGGCGCGACGGGCGTCTCGGCTCGATGCCTATTCGCATAGCCGAGGCAT CTGCCGTCCGGCGGATCATTCTCGACCGCTTTGGGCCGGAAGGAACGGCCCGCAAGCGATGGATGATCTGTGGCGACCTC AACGACTATCGCGAACGCGTTCTCATCGAAGGCGAGGCACACACGGGCTATGATTTCCGGCCCGTACGCGAGGCGCAATC CAGCGTCAATGTGCTCACCGATGGCGGCTTTTGCGAGAATGTGGTGGAGCGGCGGCCGGAACTCGACCGCTGGACGCTAT ATCATACGCGCGGCCCCGAGGAGCGTCATCTGTGCCAACTCGACTACATCCTGCTGTCGCCCGCGCTGGCGCAGAAGAAT GGCAAGGTGATGCCGGATATCGTGCGAAATGGGCAGCCCTGGCGAACCATTTTTCCACCCGGTCAAGAAGTAGAACGATA TCCGCGCACGGGTTGGGACAGGCCCAAGGCCTCCGATCACTGCCCGGTGGCCATATCACTGGATTTGATCTGA
Upstream 100 bases:
>100_bases TGGCGGATGAATGCGGCATGAACGCGAAGCAACGCTTCGATTGACCACACGATCGAGTGATCGCTTGCCTTTCATTTGCG TGCGGGTCAAAAGAGGAAGC
Downstream 100 bases:
>100_bases GCGCTTGAGCCCACACACGGTTCCAAATCTGTATTATAGGTGGACCAAGGGCTTTCTGCCGATTTTCAGGTAACCGGGAG AGGTGTGCCGTGAAAGCAAG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Exo/Endo Phosphatase; Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQLTALAIAATRADILCLQEVD NQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMMRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLG PNERIFRRDCLEVDVLVGGKPLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPEERHLCQLDYILLSPALAQKN GKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDHCPVAISLDLI
Sequences:
>Translated_370_residues MSVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQLTALAIAATRADILCLQEVD NQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMMRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLG PNERIFRRDCLEVDVLVGGKPLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPEERHLCQLDYILLSPALAQKN GKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDHCPVAISLDLI >Mature_369_residues SVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQLTALAIAATRADILCLQEVDN QAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIMMRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGP NERIFRRDCLEVDVLVGGKPLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDLN DYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPEERHLCQLDYILLSPALAQKNG KVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDHCPVAISLDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42432; Mature: 42301
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQ CEEEEEEECHHHHHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHH LTALAIAATRADILCLQEVDNQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIM HHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEE MRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGK EEECCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECCC PLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL CEEEEEEEEEHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCC NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPE CHHCCEEEEECCCCCCCCCCHHHHHHCCCEEEECCCHHHHHHHCCCCCCCEEEEECCCCC ERHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDH HHHHEEHHHHHHCHHHHHCCCCCCHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCC CPVAISLDLI CCEEEEEECC >Mature Secondary Structure SVRIATFNVENLMNRFDFSGFRNQLHQDRTLAMFEIKDEEEYRELERARTIAHTDDTRQ EEEEEEECHHHHHHHHCCHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHH LTALAIAATRADILCLQEVDNQAALNAFEYGYLHKMIGAGYREKYSSAGNDARGIDVAIM HHHHHHHHHHHHEEEEHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEE MRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGK EEECCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHCCEEEEEECCC PLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL CEEEEEEEEEHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCC NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPE CHHCCEEEEECCCCCCCCCCHHHHHHCCCEEEECCCHHHHHHHCCCCCCCEEEEECCCCC ERHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDH HHHHEEHHHHHHCHHHHHCCCCCCHHHHCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCC CPVAISLDLI CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA