| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633847
Identifier: 110633847
GI number: 110633847
Start: 1591023
End: 1591820
Strand: Direct
Name: 110633847
Synonym: Meso_1494
Alternate gene names: NA
Gene position: 1591023-1591820 (Clockwise)
Preceding gene: 110633846
Following gene: 110633848
Centisome position: 36.06
GC content: 55.51
Gene sequence:
>798_bases ATGGACCAGGCGCGGGCTCCCGGCCCTGGCGTGCGGACGAGATCAAGCCAGGTGCAAATTGACCGTTCCTCTAGTGCGTC ATTGTCGGCCTATAGAAGATTGAAAAGAGATGTCGCCAAGCCATGCGCCAAAGTCATCAAGGGAAAATGCAAAAACATAA AGGATGACTATCAGCTTCTGAAGAGAAACTACACGACCCTCTTTAGCCGGCTGCAGAAGAATGACTATTGGCAGACCGGC ATGGAGTTGGGCGCCGCCGGATTCAGCTATGCATCTGCCTTTTCTGAGGGAATGCAGGCCAATTATCTCGATGGCGCCAG CAATGAGTTTTGGCGCGCGTCCGCGCCCGAGGCGCCCACTGAAGGCAATGACCTTTCGACGCGATTGGGAAACTTGGCCA ATAGGGCGACGAGATCCGCCACCTCCTATGGACGGATCAAGTTTATTGCCAATCTGGTTGATATGCCGCCTGTGGCTGGC TTCGCCAATCTGGGCTACTCGATCCATTGGGGGAAAAACGCCTGCTATACCGTGCAAAAATCCTGGCATGATCTCAAGGA TCACTACAGGCAAGGCAGTCCTCTGGTGGTCTCCGACACGATCAATCTCCTCAGCGGAGGCTACAACGGAATAGCGGCGG GTCTCAGCGCTGCTTCCACGTTTTTCCCTCCCGCCGCGATAGCATCTTCCGGAGCATGGGTGGCGGGCGCAGGATGCGGA GTTCTGGCGAAAGCCGCGGAAAAATACGCCCCTCAAATCGAACAGCAGACCGAAAAGCTCCTTGCGAAGCTGGATTGA
Upstream 100 bases:
>100_bases TAACGAGCTGCGGAATCGTTTGGGAAAACGGTCGAACGCAAGAGCGGTCCCCTGCAAAAGCGAGGCTGCTATCGGGGACC TTGGGCGGGAAAGGTCGCTG
Downstream 100 bases:
>100_bases GTTGAGCAGCCCTTGCAAAGCCAATCTGCTTTAGCCCCCGTCGCGCTTTGATCTCCCGCGACGGGGCGTTGAAACGCCGC TCGCATGCGCGCCCGATACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDQARAPGPGVRTRSSQVQIDRSSSASLSAYRRLKRDVAKPCAKVIKGKCKNIKDDYQLLKRNYTTLFSRLQKNDYWQTG MELGAAGFSYASAFSEGMQANYLDGASNEFWRASAPEAPTEGNDLSTRLGNLANRATRSATSYGRIKFIANLVDMPPVAG FANLGYSIHWGKNACYTVQKSWHDLKDHYRQGSPLVVSDTINLLSGGYNGIAAGLSAASTFFPPAAIASSGAWVAGAGCG VLAKAAEKYAPQIEQQTEKLLAKLD
Sequences:
>Translated_265_residues MDQARAPGPGVRTRSSQVQIDRSSSASLSAYRRLKRDVAKPCAKVIKGKCKNIKDDYQLLKRNYTTLFSRLQKNDYWQTG MELGAAGFSYASAFSEGMQANYLDGASNEFWRASAPEAPTEGNDLSTRLGNLANRATRSATSYGRIKFIANLVDMPPVAG FANLGYSIHWGKNACYTVQKSWHDLKDHYRQGSPLVVSDTINLLSGGYNGIAAGLSAASTFFPPAAIASSGAWVAGAGCG VLAKAAEKYAPQIEQQTEKLLAKLD >Mature_265_residues MDQARAPGPGVRTRSSQVQIDRSSSASLSAYRRLKRDVAKPCAKVIKGKCKNIKDDYQLLKRNYTTLFSRLQKNDYWQTG MELGAAGFSYASAFSEGMQANYLDGASNEFWRASAPEAPTEGNDLSTRLGNLANRATRSATSYGRIKFIANLVDMPPVAG FANLGYSIHWGKNACYTVQKSWHDLKDHYRQGSPLVVSDTINLLSGGYNGIAAGLSAASTFFPPAAIASSGAWVAGAGCG VLAKAAEKYAPQIEQQTEKLLAKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28617; Mature: 28617
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQARAPGPGVRTRSSQVQIDRSSSASLSAYRRLKRDVAKPCAKVIKGKCKNIKDDYQLL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KRNYTTLFSRLQKNDYWQTGMELGAAGFSYASAFSEGMQANYLDGASNEFWRASAPEAPT HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EGNDLSTRLGNLANRATRSATSYGRIKFIANLVDMPPVAGFANLGYSIHWGKNACYTVQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCEEHHHH SWHDLKDHYRQGSPLVVSDTINLLSGGYNGIAAGLSAASTFFPPAAIASSGAWVAGAGCG HHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHH VLAKAAEKYAPQIEQQTEKLLAKLD HHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MDQARAPGPGVRTRSSQVQIDRSSSASLSAYRRLKRDVAKPCAKVIKGKCKNIKDDYQLL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KRNYTTLFSRLQKNDYWQTGMELGAAGFSYASAFSEGMQANYLDGASNEFWRASAPEAPT HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EGNDLSTRLGNLANRATRSATSYGRIKFIANLVDMPPVAGFANLGYSIHWGKNACYTVQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCEEHHHH SWHDLKDHYRQGSPLVVSDTINLLSGGYNGIAAGLSAASTFFPPAAIASSGAWVAGAGCG HHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCEEECCCHH VLAKAAEKYAPQIEQQTEKLLAKLD HHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA