| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is nadE [H]
Identifier: 110633816
GI number: 110633816
Start: 1560766
End: 1562484
Strand: Direct
Name: nadE [H]
Synonym: Meso_1463
Alternate gene names: 110633816
Gene position: 1560766-1562484 (Clockwise)
Preceding gene: 110633815
Following gene: 110633817
Centisome position: 35.37
GC content: 61.61
Gene sequence:
>1719_bases ATGAGCTTCATGACGAACGCCGCTCCAGACATTTTCCGCATCGCCGTCGCCCAGCTGAATCCCACGGTGGGCGACATCCC CGGCAATCTCGCCAAGGCGCGCGAGGCGCGCGCGGACGCGGCGCGGAAAGGCGCGGATCTCGTTCTTTTCACCGAGCTTT TCATCGCCGGCTACCCGCCCGAGGATCTTGTGCTGAAACCGGCCTTTGTCGCAGCCTGCGAGAAGGCGGTGCTGGAACTG GCTGCCGAGACGGCCGATGGCGGCCCTGGCGTCATCATCGGCACGCCGCTCAAGCGCGAAAGCGGCGTGCACAACGCGGT CGTGGTGCTCGACGACGGAAAAGTGATCGCCGAGCGCTATAAGCTCGACCTGCCAAATTACGGCGAGTTTGACGAGAAGC GCGTCTTCGATGCCGCTCCCAGCATGCCCGGCCCGGTGAATTTCCGCGGTGTGCGCATCGGAATTCCCATTTGCGAGGAT ATCTGGGGCAAGCTCGACGTCTGCGAAACCCTTGCTGAATCCGGTGCCGAAATCCTCCTCGTTCCAAACGGCTCGCCCTA CTACCGGGGCAAAGTGGAGGTGCGTCAGCAGGTCGTCATCGTGCAGGTGATCGAGAGCGGCCTGCCGATCGTCTATGCCA ATATGCTTGGCGGGCAGGACGAACTGGTCTTCGACGGCGCTTCCTTTGCGATCCAGGCCGACAAGTCGCTCGCCTTTCAG ATGAGCCAGTTCGAGGAGGCGGTAGCCGTCACAACCTGGCGCAGAGGCCGCGACGCCGCAGGCGCGCAAAGGGGAAAGGA CGATGAATGGGTCTGTGCCGAGGGGCCAATGGCGATCATTCCCGAGAAGGAGGAGGCGGACTACCGCGCCTGCATGCTTG GCCTTCGCGACTATGTGAACAAGAACGGCTTCAAGAATGTGGTGCTGGGCCTTTCCGGGGGCGTCGATTCCGCGCTCTGC GCGGCGCTTGCCGTTGATGCCTTGGGGGAAGAGCGGGTGAGGGCGGTCATGTTGCCCTATCGATATACATCCAAGGAATC GCTGCGGGACGCGGAGGCTTGCGCGCGGGCGCTCGGCTGCCGCTATGACATCGTACCCATCAACGAGCCGGTGGAAGGCT TCAGGAATGCGCTCGGCCAGCTTTTCGAGGGCACCGAAGAGGGTATCACCGAGGAAAACCTCCAGAGCCGGGCGCGCGGC ACGCTGCTTATGGCGATCTCGAACAAGTTTGGCTCCATGGTGGTAACCACCGGCAACAAGTCTGAAATGTCCGTCGGCTA CGCCACGCTCTATGGCGACATGAATGGCGGCTTTAATCCGATAAAAGACCTTTATAAAATGCAGGTCTACGCGCTCTGCC GCTGGCGCAATGCGCATGTGCCGCCGACCGCGCTCGGGCCTTCCGGCGAAGTGATCCCCGCATCGATCATCGACAAGGCG CCTTCGGCCGAACTGCGCGAGAACCAGACGGATCAGGATTCCCTGCCGCCTTACGCCGTGTTGGATGATATCCTCGAATG CCTGGTCGAGAATGAATTGGGGGTGGACGAGATCGTCGCGCGCGGACACGATCGCGATCTTGTCCATCGCATCGAGCATC TTCTTTACGTCGCCGAATACAAGCGCCGTCAGGCAGCACCCGGCGTGAAGATCACAAAGAAGAATTTCGGGCGCGACCGG CGCTATCCCATCACCAACAAATTCCGCGACCGGGGATGA
Upstream 100 bases:
>100_bases ATTGGCAGCAGGTGAGCGGGGCAGGCAAAGCACGATCTCTGCGGCGCTGCAGGCTTCCATACGGGCGCCGATCCTTGCAA GCCTTCCGGACGCAAGCTAG
Downstream 100 bases:
>100_bases GACAAGCCTTGGCCGCTAGCCTGTGAACAACGTGCATTGCTCAAACGGGGCCGCGACAGGCCGGCAGGCGGGGTATAAGA TCGCCATAACAGGCGGGACC
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MSFMTNAAPDIFRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPPEDLVLKPAFVAACEKAVLEL AAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERYKLDLPNYGEFDEKRVFDAAPSMPGPVNFRGVRIGIPICED IWGKLDVCETLAESGAEILLVPNGSPYYRGKVEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQ MSQFEEAVAVTTWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVNKNGFKNVVLGLSGGVDSALC AALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGCRYDIVPINEPVEGFRNALGQLFEGTEEGITEENLQSRARG TLLMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKA PSAELRENQTDQDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEYKRRQAAPGVKITKKNFGRDR RYPITNKFRDRG
Sequences:
>Translated_572_residues MSFMTNAAPDIFRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPPEDLVLKPAFVAACEKAVLEL AAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERYKLDLPNYGEFDEKRVFDAAPSMPGPVNFRGVRIGIPICED IWGKLDVCETLAESGAEILLVPNGSPYYRGKVEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQ MSQFEEAVAVTTWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVNKNGFKNVVLGLSGGVDSALC AALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGCRYDIVPINEPVEGFRNALGQLFEGTEEGITEENLQSRARG TLLMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKA PSAELRENQTDQDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEYKRRQAAPGVKITKKNFGRDR RYPITNKFRDRG >Mature_571_residues SFMTNAAPDIFRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPPEDLVLKPAFVAACEKAVLELA AETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERYKLDLPNYGEFDEKRVFDAAPSMPGPVNFRGVRIGIPICEDI WGKLDVCETLAESGAEILLVPNGSPYYRGKVEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQM SQFEEAVAVTTWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVNKNGFKNVVLGLSGGVDSALCA ALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGCRYDIVPINEPVEGFRNALGQLFEGTEEGITEENLQSRARGT LLMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKAP SAELRENQTDQDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEYKRRQAAPGVKITKKNFGRDRR YPITNKFRDRG
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI24641841, Length=599, Percent_Identity=22.7045075125209, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24641843, Length=599, Percent_Identity=22.7045075125209, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 62437; Mature: 62306
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00920 NITRIL_CHT_1 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMTNAAPDIFRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPP CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCC EDLVLKPAFVAACEKAVLELAAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERY HHCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEHHH KLDLPNYGEFDEKRVFDAAPSMPGPVNFRGVRIGIPICEDIWGKLDVCETLAESGAEILL CCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCEEEE VPNGSPYYRGKVEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQ EECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCEEEECCCHHHHH MSQFEEAVAVTTWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHC KNGFKNVVLGLSGGVDSALCAALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGC CCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHHEEEEECCCCCCHHHHHHHHHHHHHHCC RYDIVPINEPVEGFRNALGQLFEGTEEGITEENLQSRARGTLLMAISNKFGSMVVTTGNK EEEEEECCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCC SEMSVGYATLYGDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKA CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC PSAELRENQTDQDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEY CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH KRRQAAPGVKITKKNFGRDRRYPITNKFRDRG HHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFMTNAAPDIFRIAVAQLNPTVGDIPGNLAKAREARADAARKGADLVLFTELFIAGYPP CCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCC EDLVLKPAFVAACEKAVLELAAETADGGPGVIIGTPLKRESGVHNAVVVLDDGKVIAERY HHCEECHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCCEEEHHH KLDLPNYGEFDEKRVFDAAPSMPGPVNFRGVRIGIPICEDIWGKLDVCETLAESGAEILL CCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCEEEE VPNGSPYYRGKVEVRQQVVIVQVIESGLPIVYANMLGGQDELVFDGASFAIQADKSLAFQ EECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCEEEECCCHHHHH MSQFEEAVAVTTWRRGRDAAGAQRGKDDEWVCAEGPMAIIPEKEEADYRACMLGLRDYVN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHC KNGFKNVVLGLSGGVDSALCAALAVDALGEERVRAVMLPYRYTSKESLRDAEACARALGC CCCCCEEEEEECCCHHHHHHHHHHHHHHCHHHHEEEEECCCCCCHHHHHHHHHHHHHHCC RYDIVPINEPVEGFRNALGQLFEGTEEGITEENLQSRARGTLLMAISNKFGSMVVTTGNK EEEEEECCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCC SEMSVGYATLYGDMNGGFNPIKDLYKMQVYALCRWRNAHVPPTALGPSGEVIPASIIDKA CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC PSAELRENQTDQDSLPPYAVLDDILECLVENELGVDEIVARGHDRDLVHRIEHLLYVAEY CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH KRRQAAPGVKITKKNFGRDRRYPITNKFRDRG HHHHCCCCCEEEHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]