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The map label for this gene is bkdR [H]

Identifier: 110633782

GI number: 110633782

Start: 1527514

End: 1527987

Strand: Direct

Name: bkdR [H]

Synonym: Meso_1429

Alternate gene names: 110633782

Gene position: 1527514-1527987 (Clockwise)

Preceding gene: 110633780

Following gene: 110633783

Centisome position: 34.62

GC content: 56.75

Gene sequence:

>474_bases
ATGCCCCTTGATAGGATTGATATTGCCATGTTGACCGCCCTTCAGGAGGACGGTCGCATGCCCAACGCAACCCTCGCGGA
AAAGGTGGGGCTCTCCCAGTCGGCCTGTTCAAGGCGGCTCGACAATCTAGAAAAGTCCGGCGCCATCAAGGGTTACCACG
CCCGGATTTCAAACGCGGCACTTGGCCACCGGATGACGGTGATCGTGCATATTTCTCTCTCCGGGCAGTTCGAGAAGACC
CTGAGCGAATTTGAGGCTGCGGTGAAGCGTTGCCCCAACGTGCTTTCCTGCCACCTAATGTCCGGCGAATATGATTACAT
CCTGAGGATAACCGCACGTGATCTCGAAGATTACGAGCGCATCCACAAGGAATGGCTGACCGCCATGCCTCATGTCATCA
AGCTCAATTCCGCTTTCGCGTTGCGGGAGGTGATCGATCGGACAGCCGTCGGCATCCGGCCTGAAATGGCGTGA

Upstream 100 bases:

>100_bases
ACAAACCGGCTGGAAGGTCCTTGTGAATATATTTGCTCGCTCCGGTCAAATTCGTTATTTCTTGCGTGACTGGGGCTTTT
TGTAGGAGAAGTTTCGAACG

Downstream 100 bases:

>100_bases
CAGGGCATCGCCATCCATGCGCCACCGGAATCAGTTGGACTGAATCTGCTACATTCATTGGAAATGCCCAAGGGTCGCGG
CGCCTGTCGGCGCGGCCCAT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPLDRIDIAMLTALQEDGRMPNATLAEKVGLSQSACSRRLDNLEKSGAIKGYHARISNAALGHRMTVIVHISLSGQFEKT
LSEFEAAVKRCPNVLSCHLMSGEYDYILRITARDLEDYERIHKEWLTAMPHVIKLNSAFALREVIDRTAVGIRPEMA

Sequences:

>Translated_157_residues
MPLDRIDIAMLTALQEDGRMPNATLAEKVGLSQSACSRRLDNLEKSGAIKGYHARISNAALGHRMTVIVHISLSGQFEKT
LSEFEAAVKRCPNVLSCHLMSGEYDYILRITARDLEDYERIHKEWLTAMPHVIKLNSAFALREVIDRTAVGIRPEMA
>Mature_156_residues
PLDRIDIAMLTALQEDGRMPNATLAEKVGLSQSACSRRLDNLEKSGAIKGYHARISNAALGHRMTVIVHISLSGQFEKTL
SEFEAAVKRCPNVLSCHLMSGEYDYILRITARDLEDYERIHKEWLTAMPHVIKLNSAFALREVIDRTAVGIRPEMA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=35.2112676056338, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=30.6666666666667, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17593; Mature: 17461

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDRIDIAMLTALQEDGRMPNATLAEKVGLSQSACSRRLDNLEKSGAIKGYHARISNAA
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGHRMTVIVHISLSGQFEKTLSEFEAAVKRCPNVLSCHLMSGEYDYILRITARDLEDYER
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEEEHHCHHHHHH
IHKEWLTAMPHVIKLNSAFALREVIDRTAVGIRPEMA
HHHHHHHHCCHHEECCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PLDRIDIAMLTALQEDGRMPNATLAEKVGLSQSACSRRLDNLEKSGAIKGYHARISNAA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LGHRMTVIVHISLSGQFEKTLSEFEAAVKRCPNVLSCHLMSGEYDYILRITARDLEDYER
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEEEHHCHHHHHH
IHKEWLTAMPHVIKLNSAFALREVIDRTAVGIRPEMA
HHHHHHHHCCHHEECCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]