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The map label for this gene is ycjX [H]

Identifier: 110633770

GI number: 110633770

Start: 1515019

End: 1516482

Strand: Reverse

Name: ycjX [H]

Synonym: Meso_1417

Alternate gene names: 110633770

Gene position: 1516482-1515019 (Counterclockwise)

Preceding gene: 110633771

Following gene: 110633769

Centisome position: 34.37

GC content: 63.32

Gene sequence:

>1464_bases
TTGCCATCGCTGACCACGTTCGCTGACGAAGCCCGCATCGCTCTCGACACCGTGGCCGACCGGACCGCAGGTCTCTGGTC
ACCTTCCATCCGGATCGGCGTGACCGGCCTCTCGCGGGCGGGCAAAACGGTCTTCATTTCCGCGCTGGTCCACAATCTGA
TCCATGGCGGACGGCTGCCGCTTTTTGAGGCGCAGTCCTCAGGCCGCATCGCCAAAGCCTATCTCGAGCATCAGCCCGAC
GATGCCGTCCCACGCTTCCAGTATGAGGACCACATCGCGGATCTTGTGGAAAGGCATGTCTGGCCCGCCTCCACGCGGGC
GATCTCGGAACTCAGACTTACCATCGAATACGAATCGGCCTCGGCCTGGGGCCGGCTCCTCTCACGCGGGAAGGTCTCGA
TCGACATCGTGGACTATCCCGGCGAGTGGCTTTTGGACCTTCCTCTCCTCGGCAAGGATTTCGAGACCTTCAGCCGCGAA
GCGATGGAACTGTCGGAACTGCCGGGGCGCGAGGATATTGCCCGTCCCTGGCGGAACCTTGCCGCCAGCATCGACCCGGA
TGGCGAGGCCGACGAGGTTCTCGCCCGAAAGCTGTTCGAAAGCTTCACCTCATATCTCAGGGCATGCAAGGAAGAGAGCC
GTGCTCTTTCCACCCTGCCGCCGGGCCGTTTCCTTATGCCGGGAGACCTGGAAGGTTCGCCTGCCCTCACCTTCGCACCC
CTTGCCAGGTTCAGCACGCGCGCACGCGCCGGCTCCATGCAAGCTATGATGGAACGGCGCTACGAGGCCTACAAAACCCA
CGTGGTGAAGCCTTTTTTTCGCGAGCATATCGCACGGCTCGACCGGCAAATCGTTCTCGTGGACGCCATGCAGGCCATCA
ATGCCGGTATGCCAGCCGTGCACGACCTGGAACGCTCCTTGATGGAAATCCTTGCCTGTTTCCGGCCCGGCCGCAGCAAC
CTGCTCACCGGTCTCGTTTCGCGCCGGATCGACCGGATTCTGATCGCCGCCACCAAGGCGGACCATATCCATCATGAGAG
CCACGACCGCCTGCAGGCAATCGTGCGGCGCCTGGCGGAGCGGGCGATAGCACGGGCGGACTTTTCCGGCGCGCTCGTCG
ACGTGGTGGCGATGGCGGCGGTCAGGGCAACGCGGGAGGGGACGGTGACGCGCGGGCGTCAGACGCTTCCCGTCATCATC
GGCACTCCGCTGGCGGGGGAAAGCATCGGCGGAGAAATATTCGACGGTGAAACGGAAACCGCCATTTTCCCCGGAGACCT
GCCGGAAAGCCCTGCTGCCTTCTTCCGCAAGGAAGCACCCGCGCCTTCCGGCGACCCTGCGATCCGCTTCGTACGCTTCC
GCCCGCCGAAGCTCGAACGCACCATGGAGGGCATTACCTTGTCGCTGCCTCACATCCGGCTTGATCGAGCCCTGCAATTC
CTTCTTGGAGACAAGCTCGCATGA

Upstream 100 bases:

>100_bases
CGCCGCGCAAGTGAGGTGCAGCGGGGCGACACCCTCAACCCTTTTCATATTCCCTTCCAATTGCCTATATCGGTGCCGGA
GAGCAGATAAGGAACACCCC

Downstream 100 bases:

>100_bases
GCGAACCGCGCCGCCCCGCCGCATTCCGGATTGAGCCCGCGCCCTCCCCCTCTCCCGAGGCGACGCGGGAAGACGTACGC
AAGCCGCGCGCCATAAGAGT

Product: protein of unknown function DUF463, YcjX-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MPSLTTFADEARIALDTVADRTAGLWSPSIRIGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQSSGRIAKAYLEHQPD
DAVPRFQYEDHIADLVERHVWPASTRAISELRLTIEYESASAWGRLLSRGKVSIDIVDYPGEWLLDLPLLGKDFETFSRE
AMELSELPGREDIARPWRNLAASIDPDGEADEVLARKLFESFTSYLRACKEESRALSTLPPGRFLMPGDLEGSPALTFAP
LARFSTRARAGSMQAMMERRYEAYKTHVVKPFFREHIARLDRQIVLVDAMQAINAGMPAVHDLERSLMEILACFRPGRSN
LLTGLVSRRIDRILIAATKADHIHHESHDRLQAIVRRLAERAIARADFSGALVDVVAMAAVRATREGTVTRGRQTLPVII
GTPLAGESIGGEIFDGETETAIFPGDLPESPAAFFRKEAPAPSGDPAIRFVRFRPPKLERTMEGITLSLPHIRLDRALQF
LLGDKLA

Sequences:

>Translated_487_residues
MPSLTTFADEARIALDTVADRTAGLWSPSIRIGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQSSGRIAKAYLEHQPD
DAVPRFQYEDHIADLVERHVWPASTRAISELRLTIEYESASAWGRLLSRGKVSIDIVDYPGEWLLDLPLLGKDFETFSRE
AMELSELPGREDIARPWRNLAASIDPDGEADEVLARKLFESFTSYLRACKEESRALSTLPPGRFLMPGDLEGSPALTFAP
LARFSTRARAGSMQAMMERRYEAYKTHVVKPFFREHIARLDRQIVLVDAMQAINAGMPAVHDLERSLMEILACFRPGRSN
LLTGLVSRRIDRILIAATKADHIHHESHDRLQAIVRRLAERAIARADFSGALVDVVAMAAVRATREGTVTRGRQTLPVII
GTPLAGESIGGEIFDGETETAIFPGDLPESPAAFFRKEAPAPSGDPAIRFVRFRPPKLERTMEGITLSLPHIRLDRALQF
LLGDKLA
>Mature_486_residues
PSLTTFADEARIALDTVADRTAGLWSPSIRIGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQSSGRIAKAYLEHQPDD
AVPRFQYEDHIADLVERHVWPASTRAISELRLTIEYESASAWGRLLSRGKVSIDIVDYPGEWLLDLPLLGKDFETFSREA
MELSELPGREDIARPWRNLAASIDPDGEADEVLARKLFESFTSYLRACKEESRALSTLPPGRFLMPGDLEGSPALTFAPL
ARFSTRARAGSMQAMMERRYEAYKTHVVKPFFREHIARLDRQIVLVDAMQAINAGMPAVHDLERSLMEILACFRPGRSNL
LTGLVSRRIDRILIAATKADHIHHESHDRLQAIVRRLAERAIARADFSGALVDVVAMAAVRATREGTVTRGRQTLPVIIG
TPLAGESIGGEIFDGETETAIFPGDLPESPAAFFRKEAPAPSGDPAIRFVRFRPPKLERTMEGITLSLPHIRLDRALQFL
LGDKLA

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1637 [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=472, Percent_Identity=36.4406779661017, Blast_Score=282, Evalue=4e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 53950; Mature: 53818

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLTTFADEARIALDTVADRTAGLWSPSIRIGVTGLSRAGKTVFISALVHNLIHGGRLP
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
LFEAQSSGRIAKAYLEHQPDDAVPRFQYEDHIADLVERHVWPASTRAISELRLTIEYESA
EEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCH
SAWGRLLSRGKVSIDIVDYPGEWLLDLPLLGKDFETFSREAMELSELPGREDIARPWRNL
HHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
AASIDPDGEADEVLARKLFESFTSYLRACKEESRALSTLPPGRFLMPGDLEGSPALTFAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEHHH
LARFSTRARAGSMQAMMERRYEAYKTHVVKPFFREHIARLDRQIVLVDAMQAINAGMPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
HDLERSLMEILACFRPGRSNLLTGLVSRRIDRILIAATKADHIHHESHDRLQAIVRRLAE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCHHHHCCCCHHHHHHHHHHHHH
RAIARADFSGALVDVVAMAAVRATREGTVTRGRQTLPVIIGTPLAGESIGGEIFDGETET
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCC
AIFPGDLPESPAAFFRKEAPAPSGDPAIRFVRFRPPKLERTMEGITLSLPHIRLDRALQF
EEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCEEECCHHHHHHHHHH
LLGDKLA
HHCCCCC
>Mature Secondary Structure 
PSLTTFADEARIALDTVADRTAGLWSPSIRIGVTGLSRAGKTVFISALVHNLIHGGRLP
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
LFEAQSSGRIAKAYLEHQPDDAVPRFQYEDHIADLVERHVWPASTRAISELRLTIEYESA
EEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCH
SAWGRLLSRGKVSIDIVDYPGEWLLDLPLLGKDFETFSREAMELSELPGREDIARPWRNL
HHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
AASIDPDGEADEVLARKLFESFTSYLRACKEESRALSTLPPGRFLMPGDLEGSPALTFAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEHHH
LARFSTRARAGSMQAMMERRYEAYKTHVVKPFFREHIARLDRQIVLVDAMQAINAGMPAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
HDLERSLMEILACFRPGRSNLLTGLVSRRIDRILIAATKADHIHHESHDRLQAIVRRLAE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCHHHHCCCCHHHHHHHHHHHHH
RAIARADFSGALVDVVAMAAVRATREGTVTRGRQTLPVIIGTPLAGESIGGEIFDGETET
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCC
AIFPGDLPESPAAFFRKEAPAPSGDPAIRFVRFRPPKLERTMEGITLSLPHIRLDRALQF
EEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCEEECCHHHHHHHHHH
LLGDKLA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]