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The map label for this gene is ycjF [C]

Identifier: 110633769

GI number: 110633769

Start: 1513958

End: 1515022

Strand: Reverse

Name: ycjF [C]

Synonym: Meso_1416

Alternate gene names: 110633769

Gene position: 1515022-1513958 (Counterclockwise)

Preceding gene: 110633770

Following gene: 110633768

Centisome position: 34.34

GC content: 66.29

Gene sequence:

>1065_bases
ATGAGCGAACCGCGCCGCCCCGCCGCATTCCGGATTGAGCCCGCGCCCTCCCCCTCTCCCGAGGCGACGCGGGAAGACGT
ACGCAAGCCGCGCGCCATAAGAGTGGACGAGGCGGTCAAGATCACGCCGGCCGAGATCGACATCTTCGATTCTCTGGAGA
CTGAAGCTTCCGCTCCGCCGCCCGCGGCAGCTCCGAAAAGGCGCTCACGCCTCGGTGCCGTTTTCGTGGCGGCGCTGGGA
ATGCTCGTCTCCCTGGCAGCGGGACTTTGGGCGGACAGTCTCATCCGCGACCTCTTCTCCCGCGCCGATTGGCTTGGCTG
GCTGGGTGCGGCGCTCGTAGCAGTCGCGGCGCTGGCGCTGTTTGCGATCGTCGTGCGCGAGGCCATCGCGGTCGCGCGGC
TTGCTTCCGTTGAAAGGATGCGGCGGCGCTCCGACGACGCTTATGAGCGTGACGATGCCAGGCAAGCGCGGGCGGTGATC
GCGGATCTGTCCTCGCTGCTTGCAAGCCACCCCGACACGGCCGCAGGGCGGCGGCAACTGGAACAGCTGGAGGGCGACGT
CATCGACGGACGCGACCTCCTGCGGATTGCCGAAAAGGAACTCCTGGCGCCCCTCGACAAGCGTGCTCAGAAACTGGTGC
TCGATGCCGCCAAGCGCGTTTCGGTTGTAACGGCGGTCAGCCCTCGGGCGCTGATGGATGTCGGCTATGTCATCTTCGAA
GCGGTGCGCCTGCTCCGCCGCCTGTCCGAGCTCTATTGCGGCCGCCCGGGCTTTTTCGGATTCCTGCGGCTGTCACGCAA
CGTGCTCGCCCATCTCGCCGTCACCGGCTCCATGGCAATGGGCGATACGATTGTGCAGCAGATCGTGGGGCACGGAATTG
CTGCCCGCCTTTCGGCCCGGCTCGGCGAGGGGGTGGTGAACGGCATGATGACGGCGCGCATCGGCATGGCTGCCATTTCG
GCGATACGCCCGCTTTCCTTCCGCGCTGTCGAGCGGCCCGGAATCGGCGATTTCCTGAAGGCGCTTACTCAATTCGCGGC
CAAAACCGACGGCAAACGAACCTGA

Upstream 100 bases:

>100_bases
GCCCGCCGAAGCTCGAACGCACCATGGAGGGCATTACCTTGTCGCTGCCTCACATCCGGCTTGATCGAGCCCTGCAATTC
CTTCTTGGAGACAAGCTCGC

Downstream 100 bases:

>100_bases
ATGCCTTTGATACAGAAGTTTATCGGGCCAACCATCGCCTGCCGGGGCTACTCAGTGATAAAGCTTTAACCAAACTTCTT
CATGCTTCGGAAATCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSEPRRPAAFRIEPAPSPSPEATREDVRKPRAIRVDEAVKITPAEIDIFDSLETEASAPPPAAAPKRRSRLGAVFVAALG
MLVSLAAGLWADSLIRDLFSRADWLGWLGAALVAVAALALFAIVVREAIAVARLASVERMRRRSDDAYERDDARQARAVI
ADLSSLLASHPDTAAGRRQLEQLEGDVIDGRDLLRIAEKELLAPLDKRAQKLVLDAAKRVSVVTAVSPRALMDVGYVIFE
AVRLLRRLSELYCGRPGFFGFLRLSRNVLAHLAVTGSMAMGDTIVQQIVGHGIAARLSARLGEGVVNGMMTARIGMAAIS
AIRPLSFRAVERPGIGDFLKALTQFAAKTDGKRT

Sequences:

>Translated_354_residues
MSEPRRPAAFRIEPAPSPSPEATREDVRKPRAIRVDEAVKITPAEIDIFDSLETEASAPPPAAAPKRRSRLGAVFVAALG
MLVSLAAGLWADSLIRDLFSRADWLGWLGAALVAVAALALFAIVVREAIAVARLASVERMRRRSDDAYERDDARQARAVI
ADLSSLLASHPDTAAGRRQLEQLEGDVIDGRDLLRIAEKELLAPLDKRAQKLVLDAAKRVSVVTAVSPRALMDVGYVIFE
AVRLLRRLSELYCGRPGFFGFLRLSRNVLAHLAVTGSMAMGDTIVQQIVGHGIAARLSARLGEGVVNGMMTARIGMAAIS
AIRPLSFRAVERPGIGDFLKALTQFAAKTDGKRT
>Mature_353_residues
SEPRRPAAFRIEPAPSPSPEATREDVRKPRAIRVDEAVKITPAEIDIFDSLETEASAPPPAAAPKRRSRLGAVFVAALGM
LVSLAAGLWADSLIRDLFSRADWLGWLGAALVAVAALALFAIVVREAIAVARLASVERMRRRSDDAYERDDARQARAVIA
DLSSLLASHPDTAAGRRQLEQLEGDVIDGRDLLRIAEKELLAPLDKRAQKLVLDAAKRVSVVTAVSPRALMDVGYVIFEA
VRLLRRLSELYCGRPGFFGFLRLSRNVLAHLAVTGSMAMGDTIVQQIVGHGIAARLSARLGEGVVNGMMTARIGMAAISA
IRPLSFRAVERPGIGDFLKALTQFAAKTDGKRT

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=345, Percent_Identity=24.9275362318841, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1416_MESSB (Q11IG3)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_673977.1
- STRING:   Q11IG3
- GeneID:   4179377
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_1416
- NMPDR:   fig|266779.1.peg.2176
- eggNOG:   COG3768
- HOGENOM:   HBG466177
- OMA:   CRPLAFR
- PhylomeDB:   Q11IG3
- ProtClustDB:   PRK05415
- BioCyc:   MSP266779:MESO_1416-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 38228; Mature: 38097

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13cd5bc8)-; HASH(0x192bfac0)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPRRPAAFRIEPAPSPSPEATREDVRKPRAIRVDEAVKITPAEIDIFDSLETEASAPP
CCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCEECCCCEEECCCHHHHHHHHHHCCCCCC
PAAAPKRRSRLGAVFVAALGMLVSLAAGLWADSLIRDLFSRADWLGWLGAALVAVAALAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIVVREAIAVARLASVERMRRRSDDAYERDDARQARAVIADLSSLLASHPDTAAGRRQL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EQLEGDVIDGRDLLRIAEKELLAPLDKRAQKLVLDAAKRVSVVTAVSPRALMDVGYVIFE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AVRLLRRLSELYCGRPGFFGFLRLSRNVLAHLAVTGSMAMGDTIVQQIVGHGIAARLSAR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH
LGEGVVNGMMTARIGMAAISAIRPLSFRAVERPGIGDFLKALTQFAAKTDGKRT
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure 
SEPRRPAAFRIEPAPSPSPEATREDVRKPRAIRVDEAVKITPAEIDIFDSLETEASAPP
CCCCCCCEEEECCCCCCCCCHHHHHHCCCCCEECCCCEEECCCHHHHHHHHHHCCCCCC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HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA