| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633705
Identifier: 110633705
GI number: 110633705
Start: 1443359
End: 1443796
Strand: Reverse
Name: 110633705
Synonym: Meso_1352
Alternate gene names: NA
Gene position: 1443796-1443359 (Counterclockwise)
Preceding gene: 110633706
Following gene: 110633704
Centisome position: 32.72
GC content: 61.19
Gene sequence:
>438_bases ATGATGGAAGAACAGGTTTTCGGCGGCGGCGCCCATGCGAAACAGCACGATCGGTCTGTTGTCCGCGCCATGTGGCGCGG GTTCCAGGGCAAATGCCCCCATTGCGGCAAGGGGCGCCTCTTCCGCTCCTTCCTCAAGACGGTGGATCGCTGCTCCGAAT GCGGCGAGGAGATGATCCACCACCGTGCGGACGACCTGCCAGCCTATCTGGTGATCGTCATCGTCGGTCATGTGGTCGTG GGGGCATTCATGGGTGTCGAGGCGGCGACCGAATGGCCGCTTTGGCTGCATCTCGCCATTTGGGCGCCGATCACCGTCAT CATGTCGCTGCTGTTGCTCGGCCCCGTCAAGGGTGCCGTTGTCGGCCTGCAATGGGCCTTGAGAATGCACGGCTTCGGCG AAGAGAAGGAAATTCTCGAAACAAAGCCCGAAATCTAG
Upstream 100 bases:
>100_bases CCCGCCTGCCCGGTTCCTCCAAATCTTTCCATAAGGCGAGACGCGGATCGGCCCGGAACCAGAAACGCCCAAGCCGCTCC ACGGTTAGGGGCAGGAGACG
Downstream 100 bases:
>100_bases GCTGCGGCGCCATGCAGCGAATGGAAGATCTAACAAGGGCCGAGGTGGACGCGGCTGAAGCCATAGGAACGGCACCTCGC GCCAAGCCGTTGCGTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Oxidase Subunit III
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MMEEQVFGGGAHAKQHDRSVVRAMWRGFQGKCPHCGKGRLFRSFLKTVDRCSECGEEMIHHRADDLPAYLVIVIVGHVVV GAFMGVEAATEWPLWLHLAIWAPITVIMSLLLLGPVKGAVVGLQWALRMHGFGEEKEILETKPEI
Sequences:
>Translated_145_residues MMEEQVFGGGAHAKQHDRSVVRAMWRGFQGKCPHCGKGRLFRSFLKTVDRCSECGEEMIHHRADDLPAYLVIVIVGHVVV GAFMGVEAATEWPLWLHLAIWAPITVIMSLLLLGPVKGAVVGLQWALRMHGFGEEKEILETKPEI >Mature_145_residues MMEEQVFGGGAHAKQHDRSVVRAMWRGFQGKCPHCGKGRLFRSFLKTVDRCSECGEEMIHHRADDLPAYLVIVIVGHVVV GAFMGVEAATEWPLWLHLAIWAPITVIMSLLLLGPVKGAVVGLQWALRMHGFGEEKEILETKPEI
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16170; Mature: 16170
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEEQVFGGGAHAKQHDRSVVRAMWRGFQGKCPHCGKGRLFRSFLKTVDRCSECGEEMIH CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HRADDLPAYLVIVIVGHVVVGAFMGVEAATEWPLWLHLAIWAPITVIMSLLLLGPVKGAV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGLQWALRMHGFGEEKEILETKPEI HHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure MMEEQVFGGGAHAKQHDRSVVRAMWRGFQGKCPHCGKGRLFRSFLKTVDRCSECGEEMIH CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HRADDLPAYLVIVIVGHVVVGAFMGVEAATEWPLWLHLAIWAPITVIMSLLLLGPVKGAV HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VGLQWALRMHGFGEEKEILETKPEI HHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA