| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633635
Identifier: 110633635
GI number: 110633635
Start: 1375439
End: 1375759
Strand: Direct
Name: 110633635
Synonym: Meso_1282
Alternate gene names: NA
Gene position: 1375439-1375759 (Clockwise)
Preceding gene: 110633628
Following gene: 110633637
Centisome position: 31.17
GC content: 59.19
Gene sequence:
>321_bases ATGAGCAATTTGAAAGAGCGTGAAGAAACATTCGAACGGATGTTCGTGCGGGACGAGGAGTTGAGATTCAAGGCCACGGC GCGGCGCAACAAGCTGCTGGGTCTTTGGGCCGCCGAGAAGCTCGGTAAGACGGGCGACCAGGCGGAGGCCTATGCGCGGG AAGTGATTAAGTCCGACTTCGAGGAATCAGGCGATGAGGACGTGTTCCGCAAGATCCGCCGCGATTTCGATGCCGCCGCC GTGAACGAGACCGACGAGGCCATTCGCGGCAAGATGGTGGATCTGCTTGGCCAAGCCATCGCCCAGGTGAAAAGCGAGTA G
Upstream 100 bases:
>100_bases TTTGCAGCGCACCTATTGACCAAGCGGAGCGCTTCTGGTCTCTCTAGGAGCAGATTGCCCTGCATGTTGCAATGTGCTGC TGCCAAGGCCGGAGACAAGG
Downstream 100 bases:
>100_bases GCGCGGGGCGCCGCCTGCGGTTTTCCGTCTAGCGGTCAGAGTTGCGAAAGGAAGCGAGCGAAAGCAAGGCTTCCTTCCGG CCACGGCCCAAAACCCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSNLKEREETFERMFVRDEELRFKATARRNKLLGLWAAEKLGKTGDQAEAYAREVIKSDFEESGDEDVFRKIRRDFDAAA VNETDEAIRGKMVDLLGQAIAQVKSE
Sequences:
>Translated_106_residues MSNLKEREETFERMFVRDEELRFKATARRNKLLGLWAAEKLGKTGDQAEAYAREVIKSDFEESGDEDVFRKIRRDFDAAA VNETDEAIRGKMVDLLGQAIAQVKSE >Mature_105_residues SNLKEREETFERMFVRDEELRFKATARRNKLLGLWAAEKLGKTGDQAEAYAREVIKSDFEESGDEDVFRKIRRDFDAAAV NETDEAIRGKMVDLLGQAIAQVKSE
Specific function: Unknown
COG id: COG5467
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12187; Mature: 12056
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLKEREETFERMFVRDEELRFKATARRNKLLGLWAAEKLGKTGDQAEAYAREVIKSDF CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EESGDEDVFRKIRRDFDAAAVNETDEAIRGKMVDLLGQAIAQVKSE HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLKEREETFERMFVRDEELRFKATARRNKLLGLWAAEKLGKTGDQAEAYAREVIKSDF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EESGDEDVFRKIRRDFDAAAVNETDEAIRGKMVDLLGQAIAQVKSE HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA