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The map label for this gene is recA [H]

Identifier: 110633616

GI number: 110633616

Start: 1356453

End: 1357535

Strand: Reverse

Name: recA [H]

Synonym: Meso_1263

Alternate gene names: 110633616

Gene position: 1357535-1356453 (Counterclockwise)

Preceding gene: 110633620

Following gene: 110633614

Centisome position: 30.77

GC content: 61.31

Gene sequence:

>1083_bases
ATGGCTCAGAACACATTGCGGCTTGTAGAGGAAAACGGGGTGGACAAGTCCAAGGCATTGGATGCAGCGCTGTCGCAAAT
CGAGCGGGCTTTCGGCAAGGGCTCGATCATGCGGCTTGGCGCCAACGACAAGGTCGTTGAAATCGAGACGATATCGACCG
GCTCGCTCGGGCTGGACATTGCGTTGGGCGTGGGCGGCCTGCCGCGCGGCCGCATTATCGAGATCTATGGGCCGGAAAGC
TCGGGCAAGACGACGCTGGCCCTGCATACGGTTGCCGAAGCGCAGAAGAAGGGCGGCATCTGCGGTTTCATCGATGCCGA
GCATGCACTCGATCCCGTTTATGCCCGTAAGCTGGGCGTGGATCTGGAGAACCTGCTCATTTCCCAGCCGGATACGGGCG
AGCAGGCCTTGGAGATTTGCGACACGCTGGTTCGTTCGGGCGCAGTGGATGTGATCGTGGTGGACTCCGTGGCGGCCCTT
ACCCCCCGCGCCGAGATCGAAGGCGAGATGGGCGAGTCGCTTCCAGGCATGCAGGCCCGCCTGATGAGCCAAGCGCTGAG
GAAGCTCACCGCATCCATTTCGCGCTCCAATACGATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGTTCGCCGGAGACGACGACCGGCGGCAACGCGCTGAAATTCTATGCATCGGTTCGTCTCGACATCCGCCGTATCGGC
TCGGTCAAGGACCGGGAAGAGACGGTCGGCAACCAGACGCGCGTGAAGGTGGTCAAAAACAAGATGGCGCCACCCTTCAA
GCAGGTCGAATTCGACATCATGTATGGCGAAGGCGTTTCGAAGACCGGCGAGCTTGTCGATCTCGGAGTGAAAGCGGGCG
TGGTGGAGAAGGCCGGCGCCTGGTTCTCCTATAACTCCCAGCGCCTCGGCCAGGGGCGGGAGAACGCGAAGCTTTTCCTG
CGCGACAATCCGGAGGTCGCGCGCGAGATCGAGTTGGCCCTCAGGCAGAATGCCGGCCTTATCGCCGAGCGCTTCCTTGA
GGCAGACAAGGACGGTTCGCTGGACGACGCCGCCGAAAGCTGA

Upstream 100 bases:

>100_bases
AGGAGGATATGCACTATTGCAAAATGCGAACAAAACGGGTACATAAAAGATCGGGAGATTGGCCAGCGCGGCCTCCATTG
AGGACAAGGGGTATTGTATC

Downstream 100 bases:

>100_bases
GCGGGAATCCCCTAAGGGTTGAAAAGGGCGCCGCCAATGTGCGGCGCCTTTCGTTTCCTGGTCAGGCGATCTGCGCGAGA
TTGGTGGAGCTGCTGTCCTG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAQNTLRLVEENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRIIEIYGPES
SGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAVDVIVVDSVAAL
TPRAEIEGEMGESLPGMQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
SVKDREETVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQGRENAKLFL
RDNPEVAREIELALRQNAGLIAERFLEADKDGSLDDAAES

Sequences:

>Translated_360_residues
MAQNTLRLVEENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRIIEIYGPES
SGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAVDVIVVDSVAAL
TPRAEIEGEMGESLPGMQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
SVKDREETVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQGRENAKLFL
RDNPEVAREIELALRQNAGLIAERFLEADKDGSLDDAAES
>Mature_359_residues
AQNTLRLVEENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPRGRIIEIYGPESS
GKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQPDTGEQALEICDTLVRSGAVDVIVVDSVAALT
PRAEIEGEMGESLPGMQARLMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGS
VKDREETVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGAWFSYNSQRLGQGRENAKLFLR
DNPEVAREIELALRQNAGLIAERFLEADKDGSLDDAAES

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=72.360248447205, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38736; Mature: 38605

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNTLRLVEENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDI
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEE
ALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEECHHHHCCHHHHHHHCC
DLENLLISQPDTGEQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQAR
CHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHC
SVKDREETVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGA
CCCCHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCEEEECCCCCCHHHCCC
WFSYNSQRLGQGRENAKLFLRDNPEVAREIELALRQNAGLIAERFLEADKDGSLDDAAES
EEECCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AQNTLRLVEENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDI
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCEEE
ALGVGGLPRGRIIEIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEECHHHHCCHHHHHHHCC
DLENLLISQPDTGEQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQAR
CHHHHEECCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKLTASISRSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
HHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHC
SVKDREETVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGVVEKAGA
CCCCHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCEEEECCCCCCHHHCCC
WFSYNSQRLGQGRENAKLFLRDNPEVAREIELALRQNAGLIAERFLEADKDGSLDDAAES
EEECCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]