| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633609
Identifier: 110633609
GI number: 110633609
Start: 1351384
End: 1352031
Strand: Reverse
Name: 110633609
Synonym: Meso_1256
Alternate gene names: NA
Gene position: 1352031-1351384 (Counterclockwise)
Preceding gene: 110633610
Following gene: 110633607
Centisome position: 30.64
GC content: 58.95
Gene sequence:
>648_bases ATGAGCGAGAACACCATGATTGCCGGCATGGAAAGCCTTAAGCAGCCCAGCGTGCGTACGCTGCCGTCGACGCTCAACTA TCTCTATCTGCTGGCGATGATGACGGTGATCGCCGCGATCCTCACCGCGGCGATGGTAATGCAATATGCCCGGGGTGAAT TGCCCTGCCCGCTTTGCCTGCTGCAGCGCGTGGCGCTGTTCGGCGTCTGTTTCGGCATCATGCAGCAGTTCCGCAACGGC TTCTCCGTTCGGAACACCGGCTTCAGCCTCCTGTTCACGGTCTTCCTGCTGGTGGTTTCGGTGCGGCAGACATTGCTCGA CATCTATCCGCGGCCAGGCCACGAATATATCGGCAGCGCCGTTTTCGGGCTCCACATGCCGGTCTGGTCAGTGCTGATCG CGCTTGCGCTGCTCATCGCCTTCACATTCGAGCTGATCTTCTGGAGCGGCAAGAACCATATGCACGAAGCGCGTCTCACC GGCCTGCCAGTGATCCGGGGTCTTGCGACGGCGCTCAGCCTTTATGTCATCCTCATCGGACTGGTAAATTTCGGGTCGGT CGTGCTGCAATGCGGCGTCGGAGAGTGTCATACCTTCGGCTATTCACTGCTCGAATCTTTGGAGGGTGCCCCAGCCACTT CAAACTAA
Upstream 100 bases:
>100_bases ACGGCTTCCGTATGCCCTGGATCCAGACCCGGATCATCGAGAACCCACCTGTCCCGGATAATACCTTCGCGGTTCTGGCA CTGACACGGGGAGAACTATC
Downstream 100 bases:
>100_bases CTCCACATCCACCACGCCGGAGACGGCACGCATGGCGGCGGCAACCTGGGGGGAGATGCGGTAGCGTTCGGGCAGGCCGA TCTCGATTTCCCCCCGGCCG
Product: disulfide bond formation protein DsbB, putative
Products: NA
Alternate protein names: Frizzled Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSENTMIAGMESLKQPSVRTLPSTLNYLYLLAMMTVIAAILTAAMVMQYARGELPCPLCLLQRVALFGVCFGIMQQFRNG FSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPVWSVLIALALLIAFTFELIFWSGKNHMHEARLT GLPVIRGLATALSLYVILIGLVNFGSVVLQCGVGECHTFGYSLLESLEGAPATSN
Sequences:
>Translated_215_residues MSENTMIAGMESLKQPSVRTLPSTLNYLYLLAMMTVIAAILTAAMVMQYARGELPCPLCLLQRVALFGVCFGIMQQFRNG FSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPVWSVLIALALLIAFTFELIFWSGKNHMHEARLT GLPVIRGLATALSLYVILIGLVNFGSVVLQCGVGECHTFGYSLLESLEGAPATSN >Mature_214_residues SENTMIAGMESLKQPSVRTLPSTLNYLYLLAMMTVIAAILTAAMVMQYARGELPCPLCLLQRVALFGVCFGIMQQFRNGF SVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSAVFGLHMPVWSVLIALALLIAFTFELIFWSGKNHMHEARLTG LPVIRGLATALSLYVILIGLVNFGSVVLQCGVGECHTFGYSLLESLEGAPATSN
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23526; Mature: 23395
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENTMIAGMESLKQPSVRTLPSTLNYLYLLAMMTVIAAILTAAMVMQYARGELPCPLCL CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LQRVALFGVCFGIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSA HHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VFGLHMPVWSVLIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNFGSVVLQCGVGECHTFGYSLLESLEGAPATSN HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SENTMIAGMESLKQPSVRTLPSTLNYLYLLAMMTVIAAILTAAMVMQYARGELPCPLCL CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LQRVALFGVCFGIMQQFRNGFSVRNTGFSLLFTVFLLVVSVRQTLLDIYPRPGHEYIGSA HHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VFGLHMPVWSVLIALALLIAFTFELIFWSGKNHMHEARLTGLPVIRGLATALSLYVILIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNFGSVVLQCGVGECHTFGYSLLESLEGAPATSN HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA