| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633589
Identifier: 110633589
GI number: 110633589
Start: 1332622
End: 1335159
Strand: Direct
Name: 110633589
Synonym: Meso_1236
Alternate gene names: NA
Gene position: 1332622-1335159 (Clockwise)
Preceding gene: 110633588
Following gene: 110633592
Centisome position: 30.2
GC content: 55.87
Gene sequence:
>2538_bases ATGACCGGCTTTACCGAGACGGCTGTGGATGTCTTTGCGCCTACTGATGCGGCGGGATATCCGCGAAGTGTCCAGAACGA CGCCGTTCAGCGGTGGGGAACAGAGGTTGAGCGCTTAATCATCGCGCTTATCGCAGACCAGGGCGGGGATATTGATCTAC CTAATCTCCTCGTGCGTGCGACGGTCACGGGCGGAACCGGCAACAACATTGTCGCGGTGCCGAATTTGCCCCTAACCGGG CCCGGTATGCAGCTGATCTCGTTACAGACGGTCGCCGAAAACTCGGGCCCAATCACGCTCGACCTTGGCGATGGAGCGAA GCCACTCCTCACCAATGGTGGACAGCAGATCGCAGCCGGGGAGGTTAAGGCGAATGACATGTTCCTGCTGGCGGATGCAG GTGTTCACTATCGCCTGTACGCTGATCCGTCCTCGCTCCGAAACAAGGAAGCGGCCGAGCTCGCGCAGCATCTCGCGGAA GCGGCGCAATTCGCAGCACAGGCGGCTCAGGCTGCTGCTGAAGCGGCGCGTGACATCGCCGCCGGATATGCTTCGGATGC GGTTTCCCAAGGCAATGTGCCGATATACTCGACTGTCGCGGGCATGCCTTCGCTTGAGGTGCCAGTAGGAATCCAGACGA TACGCGTTAACGGATACGCTTCATCCGGAGATGGCGGAGGCGGCCTGTTCGTTGACCAAAATAATGGTTCAACGGATACC TTCCAGTCTGGGGGTACCACTGCAAGGACTTGGTACCGCGCTTATGAATATGAGAATTCCGTAGCGGTTCCTGATGACAT CGGGAAACTAAATCCTGGGGTAAGCGCGCCATCCATAAATGTCCTAGGGTATCCCAATTCTCCTGGCGCTCGTAACGATT GGGTTCGGTCGGACAGCAATCCATCCCATGGAATCTACCGGACCGATGAGAATGGCCAGGTTTGGGTTCCTAGCGCATTC ACCGTAAAGGCACAGGATTTCGGGCCTTGGCAGCAAAACCAGATTGCGAATCAGGCTCTACAGAACGCCGTCGATTTCAG TGTTGCCCGTGGATATGGGCAGATCATTCTGCCCCCCGGTAACGTCTATCTCGAAAATCTAGTCTCCGGCGATAGCTCCA GCAAAATCATTTCCATCATTGGGGCTGGGATGCAGAGCACGACCCTTACGCTGGATGCTATCTCATCGGCCAACGGTATC GCTCTTACATCCGCTGATCGTTTAGCCGCAACGCACTTCCGGGATTTCAGTATTGTTATTGACGGTCAAGCTTCCGGCGG AACGGCTCTAAAATCCACAATGCCGCCCGGGGGCGTTCAAGATCGACCATCCGCGATCCTACAAAATGTCAGGGTCAATG GTCTGGCTATCGCAACTGACTATGTAACATTCGGGATCGATGTGACGGGGCACTGGCGTCCTCGCCTTATAGACTGCTTT GCGACGGGCTGCTGGGGACCTGAGGTGGTGGCTCCGGATGGTCTATATTCGGATACCGATCCACGTTTTTTGATGAACAA GGGATTTATCCTCGACGGTTGCTATTCACCCTATGTTGTTCGATGCCGTGCATCTTCCGCCCATTGGGGGTTTTTCTCTC AAGGAACGGCAGAGGAAGCATGGTATTTCCATGAGTGTATCGCCAATGAGGTGCGCAAAGGCTATTACATCGAGCGAACT GATCCAGAGCCCCTTGGTTACATGTACAATTGCCACGCCTCCTATCGGGACAATGGCATCTGGATCAAAGGCGGTAAGTT TTTGGAAATTTACCGGAACCTTATCTATCAGATAGACCCCAACAACCACTCTTTGTCGGCACCGGTTGATATTTTGCTCA GCAATGTCACTGACACAACGCTTGCGGCAAACACCCACCACTATGACGGAGATACCCGGCGCATCGCCAACCAAATTGAT ACGAGCGCCCTTGCTCGGGACATAGACATATTCGACTACAACGTCACTGGCACAGTGGCAGAGGTCGTTAGGATTGGCCT TGGAGCGTCCGGAGTGCAGCTTAGACCGGGGAGGCTGACCGGTACAATCGGGCAGCATTTGGCGGGGACGTTCGGGCAGG CCAACATCACCGTCTTGCGGCGCGTCACGCCTACCACGGAGGTTGTTCGCACGGGATCACCTCAAGGCATCCCGAATAAT GTGTTCACAGCCGTCCAGTGGAACACCAAAACACGGGACGACCTCGGCATGTTTGATGCGGGCGCAAGCTCAACGAACTT TGTCGTGCCTGCCCATGAGGGGATCCGGTTTGTCCGGGTCAGTGTCAACGTAGAGTTTGCAGCGAACGATACTGGAGTGC GAGCGATCCGGCTGCGCCGCAACGGAGCTGCGGCGCAAGGTGGTTTCAATGAGCTTCAGCCCGCAGGTTCAGGGGCGTAT GGCATGGCGGTGACATCCGGGAAAGTAGCTGTGGCGGCCGGCGACGTCCTAACCGTTGAGGTTTTCCAGACCAGCGGGGC TGATTTGGATCTAAACGCGGGGCTTTACTCGTGGTGCAGTCTGGAGGTGGTCAATTGA
Upstream 100 bases:
>100_bases CTCCTACACCAGCAATGGCACCAGGGGCGCATACGCAACCGGCAGCTTCAACATTCCGGGCAATTAAGCCCCCGCTCATT CTTGAAATCTGGAGATCTTG
Downstream 100 bases:
>100_bases CCACCTCCTCCACATCTCCCTTCGCAGACCGCCATTCGTACGGCGTGAACTCTGAAAAGTAAGGCTCCGGGTCATTGAGG TGGGCCGCAATCCTGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 844
Protein sequence:
>845_residues MTGFTETAVDVFAPTDAAGYPRSVQNDAVQRWGTEVERLIIALIADQGGDIDLPNLLVRATVTGGTGNNIVAVPNLPLTG PGMQLISLQTVAENSGPITLDLGDGAKPLLTNGGQQIAAGEVKANDMFLLADAGVHYRLYADPSSLRNKEAAELAQHLAE AAQFAAQAAQAAAEAARDIAAGYASDAVSQGNVPIYSTVAGMPSLEVPVGIQTIRVNGYASSGDGGGGLFVDQNNGSTDT FQSGGTTARTWYRAYEYENSVAVPDDIGKLNPGVSAPSINVLGYPNSPGARNDWVRSDSNPSHGIYRTDENGQVWVPSAF TVKAQDFGPWQQNQIANQALQNAVDFSVARGYGQIILPPGNVYLENLVSGDSSSKIISIIGAGMQSTTLTLDAISSANGI ALTSADRLAATHFRDFSIVIDGQASGGTALKSTMPPGGVQDRPSAILQNVRVNGLAIATDYVTFGIDVTGHWRPRLIDCF ATGCWGPEVVAPDGLYSDTDPRFLMNKGFILDGCYSPYVVRCRASSAHWGFFSQGTAEEAWYFHECIANEVRKGYYIERT DPEPLGYMYNCHASYRDNGIWIKGGKFLEIYRNLIYQIDPNNHSLSAPVDILLSNVTDTTLAANTHHYDGDTRRIANQID TSALARDIDIFDYNVTGTVAEVVRIGLGASGVQLRPGRLTGTIGQHLAGTFGQANITVLRRVTPTTEVVRTGSPQGIPNN VFTAVQWNTKTRDDLGMFDAGASSTNFVVPAHEGIRFVRVSVNVEFAANDTGVRAIRLRRNGAAAQGGFNELQPAGSGAY GMAVTSGKVAVAAGDVLTVEVFQTSGADLDLNAGLYSWCSLEVVN
Sequences:
>Translated_845_residues MTGFTETAVDVFAPTDAAGYPRSVQNDAVQRWGTEVERLIIALIADQGGDIDLPNLLVRATVTGGTGNNIVAVPNLPLTG PGMQLISLQTVAENSGPITLDLGDGAKPLLTNGGQQIAAGEVKANDMFLLADAGVHYRLYADPSSLRNKEAAELAQHLAE AAQFAAQAAQAAAEAARDIAAGYASDAVSQGNVPIYSTVAGMPSLEVPVGIQTIRVNGYASSGDGGGGLFVDQNNGSTDT FQSGGTTARTWYRAYEYENSVAVPDDIGKLNPGVSAPSINVLGYPNSPGARNDWVRSDSNPSHGIYRTDENGQVWVPSAF TVKAQDFGPWQQNQIANQALQNAVDFSVARGYGQIILPPGNVYLENLVSGDSSSKIISIIGAGMQSTTLTLDAISSANGI ALTSADRLAATHFRDFSIVIDGQASGGTALKSTMPPGGVQDRPSAILQNVRVNGLAIATDYVTFGIDVTGHWRPRLIDCF ATGCWGPEVVAPDGLYSDTDPRFLMNKGFILDGCYSPYVVRCRASSAHWGFFSQGTAEEAWYFHECIANEVRKGYYIERT DPEPLGYMYNCHASYRDNGIWIKGGKFLEIYRNLIYQIDPNNHSLSAPVDILLSNVTDTTLAANTHHYDGDTRRIANQID TSALARDIDIFDYNVTGTVAEVVRIGLGASGVQLRPGRLTGTIGQHLAGTFGQANITVLRRVTPTTEVVRTGSPQGIPNN VFTAVQWNTKTRDDLGMFDAGASSTNFVVPAHEGIRFVRVSVNVEFAANDTGVRAIRLRRNGAAAQGGFNELQPAGSGAY GMAVTSGKVAVAAGDVLTVEVFQTSGADLDLNAGLYSWCSLEVVN >Mature_844_residues TGFTETAVDVFAPTDAAGYPRSVQNDAVQRWGTEVERLIIALIADQGGDIDLPNLLVRATVTGGTGNNIVAVPNLPLTGP GMQLISLQTVAENSGPITLDLGDGAKPLLTNGGQQIAAGEVKANDMFLLADAGVHYRLYADPSSLRNKEAAELAQHLAEA AQFAAQAAQAAAEAARDIAAGYASDAVSQGNVPIYSTVAGMPSLEVPVGIQTIRVNGYASSGDGGGGLFVDQNNGSTDTF QSGGTTARTWYRAYEYENSVAVPDDIGKLNPGVSAPSINVLGYPNSPGARNDWVRSDSNPSHGIYRTDENGQVWVPSAFT VKAQDFGPWQQNQIANQALQNAVDFSVARGYGQIILPPGNVYLENLVSGDSSSKIISIIGAGMQSTTLTLDAISSANGIA LTSADRLAATHFRDFSIVIDGQASGGTALKSTMPPGGVQDRPSAILQNVRVNGLAIATDYVTFGIDVTGHWRPRLIDCFA TGCWGPEVVAPDGLYSDTDPRFLMNKGFILDGCYSPYVVRCRASSAHWGFFSQGTAEEAWYFHECIANEVRKGYYIERTD PEPLGYMYNCHASYRDNGIWIKGGKFLEIYRNLIYQIDPNNHSLSAPVDILLSNVTDTTLAANTHHYDGDTRRIANQIDT SALARDIDIFDYNVTGTVAEVVRIGLGASGVQLRPGRLTGTIGQHLAGTFGQANITVLRRVTPTTEVVRTGSPQGIPNNV FTAVQWNTKTRDDLGMFDAGASSTNFVVPAHEGIRFVRVSVNVEFAANDTGVRAIRLRRNGAAAQGGFNELQPAGSGAYG MAVTSGKVAVAAGDVLTVEVFQTSGADLDLNAGLYSWCSLEVVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89668; Mature: 89537
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFTETAVDVFAPTDAAGYPRSVQNDAVQRWGTEVERLIIALIADQGGDIDLPNLLVRA CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEE TVTGGTGNNIVAVPNLPLTGPGMQLISLQTVAENSGPITLDLGDGAKPLLTNGGQQIAAG EEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCHHHCCCCCEEEEC EVKANDMFLLADAGVHYRLYADPSSLRNKEAAELAQHLAEAAQFAAQAAQAAAEAARDIA EEECCCEEEEEECCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYASDAVSQGNVPIYSTVAGMPSLEVPVGIQTIRVNGYASSGDGGGGLFVDQNNGSTDT HHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCC FQSGGTTARTWYRAYEYENSVAVPDDIGKLNPGVSAPSINVLGYPNSPGARNDWVRSDSN CCCCCCCHHHEEEEEECCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PSHGIYRTDENGQVWVPSAFTVKAQDFGPWQQNQIANQALQNAVDFSVARGYGQIILPPG CCCCEEEECCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC NVYLENLVSGDSSSKIISIIGAGMQSTTLTLDAISSANGIALTSADRLAATHFRDFSIVI CHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCHHHHHEECEEEEEE DGQASGGTALKSTMPPGGVQDRPSAILQNVRVNGLAIATDYVTFGIDVTGHWRPRLIDCF ECCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCEEEEH ATGCWGPEVVAPDGLYSDTDPRFLMNKGFILDGCYSPYVVRCRASSAHWGFFSQGTAEEA HCCCCCCCEECCCCCCCCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHH WYFHECIANEVRKGYYIERTDPEPLGYMYNCHASYRDNGIWIKGGKFLEIYRNLIYQIDP HHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECEECCCCEEEECCHHHHHHHHHEEEECC NNHSLSAPVDILLSNVTDTTLAANTHHYDGDTRRIANQIDTSALARDIDIFDYNVTGTVA CCCCCCCCHHHHEECCCCCEEEECCEECCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHH EVVRIGLGASGVQLRPGRLTGTIGQHLAGTFGQANITVLRRVTPTTEVVRTGSPQGIPNN HHHHHCCCCCCCEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCC VFTAVQWNTKTRDDLGMFDAGASSTNFVVPAHEGIRFVRVSVNVEFAANDTGVRAIRLRR EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEEEC NGAAAQGGFNELQPAGSGAYGMAVTSGKVAVAAGDVLTVEVFQTSGADLDLNAGLYSWCS CCCCCCCCCHHCCCCCCCCEEEEEECCEEEEEECCEEEEEEEECCCCCEEECCCEEEEEE LEVVN EEEEC >Mature Secondary Structure TGFTETAVDVFAPTDAAGYPRSVQNDAVQRWGTEVERLIIALIADQGGDIDLPNLLVRA CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEE TVTGGTGNNIVAVPNLPLTGPGMQLISLQTVAENSGPITLDLGDGAKPLLTNGGQQIAAG EEECCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCHHHCCCCCEEEEC EVKANDMFLLADAGVHYRLYADPSSLRNKEAAELAQHLAEAAQFAAQAAQAAAEAARDIA EEECCCEEEEEECCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGYASDAVSQGNVPIYSTVAGMPSLEVPVGIQTIRVNGYASSGDGGGGLFVDQNNGSTDT HHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCC FQSGGTTARTWYRAYEYENSVAVPDDIGKLNPGVSAPSINVLGYPNSPGARNDWVRSDSN CCCCCCCHHHEEEEEECCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PSHGIYRTDENGQVWVPSAFTVKAQDFGPWQQNQIANQALQNAVDFSVARGYGQIILPPG CCCCEEEECCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC NVYLENLVSGDSSSKIISIIGAGMQSTTLTLDAISSANGIALTSADRLAATHFRDFSIVI CHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCHHHHHEECEEEEEE DGQASGGTALKSTMPPGGVQDRPSAILQNVRVNGLAIATDYVTFGIDVTGHWRPRLIDCF ECCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCEEEEH ATGCWGPEVVAPDGLYSDTDPRFLMNKGFILDGCYSPYVVRCRASSAHWGFFSQGTAEEA HCCCCCCCEECCCCCCCCCCCCEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHH WYFHECIANEVRKGYYIERTDPEPLGYMYNCHASYRDNGIWIKGGKFLEIYRNLIYQIDP HHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECEECCCCEEEECCHHHHHHHHHEEEECC NNHSLSAPVDILLSNVTDTTLAANTHHYDGDTRRIANQIDTSALARDIDIFDYNVTGTVA CCCCCCCCHHHHEECCCCCEEEECCEECCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHH EVVRIGLGASGVQLRPGRLTGTIGQHLAGTFGQANITVLRRVTPTTEVVRTGSPQGIPNN HHHHHCCCCCCCEECCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCC VFTAVQWNTKTRDDLGMFDAGASSTNFVVPAHEGIRFVRVSVNVEFAANDTGVRAIRLRR EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEEEC NGAAAQGGFNELQPAGSGAYGMAVTSGKVAVAAGDVLTVEVFQTSGADLDLNAGLYSWCS CCCCCCCCCHHCCCCCCCCEEEEEECCEEEEEECCEEEEEEEECCCCCEEECCCEEEEEE LEVVN EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA