| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633586
Identifier: 110633586
GI number: 110633586
Start: 1329385
End: 1329969
Strand: Direct
Name: 110633586
Synonym: Meso_1233
Alternate gene names: NA
Gene position: 1329385-1329969 (Clockwise)
Preceding gene: 110633585
Following gene: 110633587
Centisome position: 30.13
GC content: 59.83
Gene sequence:
>585_bases ATGGCAACAGCGGAAGCGATCCTCGACAAACTGTCGCGGCCGCATGTACAGCGCGCGATTTTCGCGTACGTCGATCTTCC TAGCGGCGAGCGCCGTCTGCACACGGGCATGGGGCAGCAGGAAATCGGCGGCCATGTCTGGGAGGGCGTGTCTGATCCCT TCGGAGGGCAGATCGTCAGCATCGGCTCAATCGAGGAACCTTGGTTCGGTCATGCACCGGTGGTCGACGTGGTCGTTTCC GGCGCCAACCGGCAATGGCTCAAGCAAATGTGGGATGAACGCGAACCACTTGATGGCGCGAGGTGCGACATCTTTTTCGC GACCTTCGATGCTGAGACCGGCGAGGTGCTGCTTGACCTGGAAGAACTGGTGCCTGGCAGGATTACCGCACCGCGCTTTT CGTTCATGGGGGCGGCCATCCGCTTCATCCAGCTCAAGATCGCATCCGTGTTCGAGGGACTGAACTTTCCTGCTGTCGAT TCGGCGTGGTCGCCGTCTGGCCAGAGGGCACGCTATCCTGGCGACAAGGGCATGGATTACATCAACGCGAAGATCATCGA ATTCTACAAGGGCGGCGAAGACTGA
Upstream 100 bases:
>100_bases CAATGCCTCCGGCGCGAGTTCCAGCACACACTGAGACCACGAGCGTGACCTTGGTTGAAGTCATTGACCCTTATGTCAGG CAGTATTTCACGGGCTGATC
Downstream 100 bases:
>100_bases TGATCGATCGTGTTCTTCGCGAAAGGGGCGAGCGCCTGCGCGCCTATGTCGATGCCGTGAAAGGCAAGCCGATGACCTGG GGCGTTGACGACTGCTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MATAEAILDKLSRPHVQRAIFAYVDLPSGERRLHTGMGQQEIGGHVWEGVSDPFGGQIVSIGSIEEPWFGHAPVVDVVVS GANRQWLKQMWDEREPLDGARCDIFFATFDAETGEVLLDLEELVPGRITAPRFSFMGAAIRFIQLKIASVFEGLNFPAVD SAWSPSGQRARYPGDKGMDYINAKIIEFYKGGED
Sequences:
>Translated_194_residues MATAEAILDKLSRPHVQRAIFAYVDLPSGERRLHTGMGQQEIGGHVWEGVSDPFGGQIVSIGSIEEPWFGHAPVVDVVVS GANRQWLKQMWDEREPLDGARCDIFFATFDAETGEVLLDLEELVPGRITAPRFSFMGAAIRFIQLKIASVFEGLNFPAVD SAWSPSGQRARYPGDKGMDYINAKIIEFYKGGED >Mature_193_residues ATAEAILDKLSRPHVQRAIFAYVDLPSGERRLHTGMGQQEIGGHVWEGVSDPFGGQIVSIGSIEEPWFGHAPVVDVVVSG ANRQWLKQMWDEREPLDGARCDIFFATFDAETGEVLLDLEELVPGRITAPRFSFMGAAIRFIQLKIASVFEGLNFPAVDS AWSPSGQRARYPGDKGMDYINAKIIEFYKGGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21458; Mature: 21327
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAEAILDKLSRPHVQRAIFAYVDLPSGERRLHTGMGQQEIGGHVWEGVSDPFGGQIVS CCCHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHCCCCHHHHCCHHHCCCCCCCCCEEEE IGSIEEPWFGHAPVVDVVVSGANRQWLKQMWDEREPLDGARCDIFFATFDAETGEVLLDL ECCCCCCCCCCCCHHHHEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEH EELVPGRITAPRFSFMGAAIRFIQLKIASVFEGLNFPAVDSAWSPSGQRARYPGDKGMDY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH INAKIIEFYKGGED HHHHHHHEECCCCC >Mature Secondary Structure ATAEAILDKLSRPHVQRAIFAYVDLPSGERRLHTGMGQQEIGGHVWEGVSDPFGGQIVS CCHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHCCCCHHHHCCHHHCCCCCCCCCEEEE IGSIEEPWFGHAPVVDVVVSGANRQWLKQMWDEREPLDGARCDIFFATFDAETGEVLLDL ECCCCCCCCCCCCHHHHEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEH EELVPGRITAPRFSFMGAAIRFIQLKIASVFEGLNFPAVDSAWSPSGQRARYPGDKGMDY HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH INAKIIEFYKGGED HHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA