| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yjbJ [C]
Identifier: 110633572
GI number: 110633572
Start: 1320115
End: 1320333
Strand: Reverse
Name: yjbJ [C]
Synonym: Meso_1219
Alternate gene names: 110633572
Gene position: 1320333-1320115 (Counterclockwise)
Preceding gene: 110633575
Following gene: 110633567
Centisome position: 29.92
GC content: 55.71
Gene sequence:
>219_bases GTGCGGTTTGAAGGTTCCCCGTCACGGAGAACAATCATGCACAAAGATGAATTGAAGGGTTCCGCAAAGAAAATGCGCGG AACAGTCAAGGACGAGGTCGGTAAAGCCACCGGCGACGATAAGATGCGCGCCGAGGGGAAGGCCGACAAAGCAGAGGGCA GCATTCAGAAAGGCGTCGGCAAGGCTAAAGACACCGTTCGCGACGCCCTCAAGCATTGA
Upstream 100 bases:
>100_bases GGCAGTGTATAGCCATTCTCTGCCAGCCAGGCATTGAACCCGCTGTCGTCTCCGTAGCCGGCCATGGTGTTTTCTCCCGC TCGGGAACTTCCGATCATTC
Downstream 100 bases:
>100_bases GGTAATGGGCCGCACAACCGCGGCCCATTCGCCTACGTCTTTGTAGCCTTGACGTATTCTGCCTTTTCCTCTTCGGACAT GGCGCTGAACGCATCTGCAT
Product: CsbD-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MRFEGSPSRRTIMHKDELKGSAKKMRGTVKDEVGKATGDDKMRAEGKADKAEGSIQKGVGKAKDTVRDALKH
Sequences:
>Translated_72_residues MRFEGSPSRRTIMHKDELKGSAKKMRGTVKDEVGKATGDDKMRAEGKADKAEGSIQKGVGKAKDTVRDALKH >Mature_72_residues MRFEGSPSRRTIMHKDELKGSAKKMRGTVKDEVGKATGDDKMRAEGKADKAEGSIQKGVGKAKDTVRDALKH
Specific function: Unknown
COG id: COG3237
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7857; Mature: 7857
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEGSPSRRTIMHKDELKGSAKKMRGTVKDEVGKATGDDKMRAEGKADKAEGSIQKGVG CCCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCC KAKDTVRDALKH HHHHHHHHHHCC >Mature Secondary Structure MRFEGSPSRRTIMHKDELKGSAKKMRGTVKDEVGKATGDDKMRAEGKADKAEGSIQKGVG CCCCCCCCCCCCCCHHHHCCHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCC KAKDTVRDALKH HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA