| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633570
Identifier: 110633570
GI number: 110633570
Start: 1318689
End: 1319714
Strand: Direct
Name: 110633570
Synonym: Meso_1217
Alternate gene names: NA
Gene position: 1318689-1319714 (Clockwise)
Preceding gene: 110633569
Following gene: 110633571
Centisome position: 29.89
GC content: 61.99
Gene sequence:
>1026_bases ATGGCATCTATGGACGTCTTCAACAACTCGGCCTTCTCGATGACCTCGCTCACCGGCGCGGTTCAGAAGGTCGGGTACAA ACCCCAGCTTCTTGGCCAGCTCGGAATTTTCGAGCCGATGCCTGTGCGTACGCGCTCGATCTTCGTTGATCGTCGCGAGA ACAAGCTGACGCTCATTCCCGCGAGCCCGGTTGGCTCTCCGCCCAAGGAATTGGAGGTTGATCCTCGTAACGCGGTTCCG CTCAAGACCGTGCGGCTTGCCAAGGGCTTCACGCTCTATGCGGAAGAGATCCAGGGCATTCGCGCATTCGGGTCTGAAAC CGAGTTCGCCCAGGTGCAAGCGGAGTACCTGCGCCGAATGGCGATGGTCCGCGACGACCTGGAGCTTACGCACGAGTACC ATCGACTGGGCGCCCTTCAGGGTCTCCTGCTCGATGCCGATGGCACGACGGTGATCTACAACTACTTCACCGAGTTCGGC GTGCCTGAGCCTGCCGCGATCGACTTCGATCTCGACAACCCGAGCCCGGCGCCTGGTGCGGTCCGTCTGAAGTGCGCCGA GGTGATCCGGTCCATGCAGCGTTCTGCTGGCGGTGCCTTCACACCGTCGACTACGGTCCACTCCCTGGTCGGGGATGCCT TCTTCGACGCTCTGATCACGCATCCGGAGGTGGAGAAGACCTACATCAACTGGCAGGCCGCCGCCGACCTGCGACAGGAC CGGTCGTTCCAGTCCTTCACCTACGGGAGCATCACCTGGCACAACTACCGGGGCACCGACGACAACTCGACCGTGGCGAT CGACACGGACGAGGCGAAGTTCTTCCCCGTGGGCGCGCGTGACGTGTTCAAGAAGGCGATGGCACCGGCCGAGTTCGGCC CGTACATTAATACGCTTGGGCAGGACACCTACGCCATCAACATCCCGGATCGCGATCGGCAGGCATGGACCCGCGGCGAG CTCTACAGCTATCCGCTGTATTTCGTGCAGCGTCCCGACGTCCTGAGGAAGGGAGTGAGGACCTGA
Upstream 100 bases:
>100_bases ATCTCATCTACCAGGCTGGCGCTGATGATGCTGCGAAGGCTACGGCCAACGCGGCTCTGGCGGCGCTCGGCATTATCGTT CGCTAAAGGAGGCCGAAACC
Downstream 100 bases:
>100_bases TCATGGCGCAGTATCACGTCAAGAACGGCAGCCATGTTGCCAAGGCCTTCAAGGTGAGGGGCGGCCATCGGGTCGTCCCT GCCGGCAAGGAGGCGGATAT
Product: phage protein GP20
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MASMDVFNNSAFSMTSLTGAVQKVGYKPQLLGQLGIFEPMPVRTRSIFVDRRENKLTLIPASPVGSPPKELEVDPRNAVP LKTVRLAKGFTLYAEEIQGIRAFGSETEFAQVQAEYLRRMAMVRDDLELTHEYHRLGALQGLLLDADGTTVIYNYFTEFG VPEPAAIDFDLDNPSPAPGAVRLKCAEVIRSMQRSAGGAFTPSTTVHSLVGDAFFDALITHPEVEKTYINWQAAADLRQD RSFQSFTYGSITWHNYRGTDDNSTVAIDTDEAKFFPVGARDVFKKAMAPAEFGPYINTLGQDTYAINIPDRDRQAWTRGE LYSYPLYFVQRPDVLRKGVRT
Sequences:
>Translated_341_residues MASMDVFNNSAFSMTSLTGAVQKVGYKPQLLGQLGIFEPMPVRTRSIFVDRRENKLTLIPASPVGSPPKELEVDPRNAVP LKTVRLAKGFTLYAEEIQGIRAFGSETEFAQVQAEYLRRMAMVRDDLELTHEYHRLGALQGLLLDADGTTVIYNYFTEFG VPEPAAIDFDLDNPSPAPGAVRLKCAEVIRSMQRSAGGAFTPSTTVHSLVGDAFFDALITHPEVEKTYINWQAAADLRQD RSFQSFTYGSITWHNYRGTDDNSTVAIDTDEAKFFPVGARDVFKKAMAPAEFGPYINTLGQDTYAINIPDRDRQAWTRGE LYSYPLYFVQRPDVLRKGVRT >Mature_340_residues ASMDVFNNSAFSMTSLTGAVQKVGYKPQLLGQLGIFEPMPVRTRSIFVDRRENKLTLIPASPVGSPPKELEVDPRNAVPL KTVRLAKGFTLYAEEIQGIRAFGSETEFAQVQAEYLRRMAMVRDDLELTHEYHRLGALQGLLLDADGTTVIYNYFTEFGV PEPAAIDFDLDNPSPAPGAVRLKCAEVIRSMQRSAGGAFTPSTTVHSLVGDAFFDALITHPEVEKTYINWQAAADLRQDR SFQSFTYGSITWHNYRGTDDNSTVAIDTDEAKFFPVGARDVFKKAMAPAEFGPYINTLGQDTYAINIPDRDRQAWTRGEL YSYPLYFVQRPDVLRKGVRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38100; Mature: 37969
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMDVFNNSAFSMTSLTGAVQKVGYKPQLLGQLGIFEPMPVRTRSIFVDRRENKLTLIP CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEE ASPVGSPPKELEVDPRNAVPLKTVRLAKGFTLYAEEIQGIRAFGSETEFAQVQAEYLRRM CCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AMVRDDLELTHEYHRLGALQGLLLDADGTTVIYNYFTEFGVPEPAAIDFDLDNPSPAPGA HHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEHHHHCCCCCCCEEEEECCCCCCCCCC VRLKCAEVIRSMQRSAGGAFTPSTTVHSLVGDAFFDALITHPEVEKTYINWQAAADLRQD EEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHC RSFQSFTYGSITWHNYRGTDDNSTVAIDTDEAKFFPVGARDVFKKAMAPAEFGPYINTLG CCCCCEECCEEEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCHHCCCHHHHCC QDTYAINIPDRDRQAWTRGELYSYPLYFVQRPDVLRKGVRT CCEEEEECCCCCCHHHHCCCEEECCEEEEECCHHHHCCCCC >Mature Secondary Structure ASMDVFNNSAFSMTSLTGAVQKVGYKPQLLGQLGIFEPMPVRTRSIFVDRRENKLTLIP CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEE ASPVGSPPKELEVDPRNAVPLKTVRLAKGFTLYAEEIQGIRAFGSETEFAQVQAEYLRRM CCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AMVRDDLELTHEYHRLGALQGLLLDADGTTVIYNYFTEFGVPEPAAIDFDLDNPSPAPGA HHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEHHHHCCCCCCCEEEEECCCCCCCCCC VRLKCAEVIRSMQRSAGGAFTPSTTVHSLVGDAFFDALITHPEVEKTYINWQAAADLRQD EEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECHHHHHHHHHC RSFQSFTYGSITWHNYRGTDDNSTVAIDTDEAKFFPVGARDVFKKAMAPAEFGPYINTLG CCCCCEECCEEEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCHHCCCHHHHCC QDTYAINIPDRDRQAWTRGELYSYPLYFVQRPDVLRKGVRT CCEEEEECCCCCCHHHHCCCEEECCEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA