| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633537
Identifier: 110633537
GI number: 110633537
Start: 1291840
End: 1293033
Strand: Reverse
Name: 110633537
Synonym: Meso_1184
Alternate gene names: NA
Gene position: 1293033-1291840 (Counterclockwise)
Preceding gene: 110633538
Following gene: 110633536
Centisome position: 29.3
GC content: 60.8
Gene sequence:
>1194_bases ATGACGAGCAATTCAGAGATAAGCGAGAAGGAAGTCGAGGCGGCGTTCCGAGCATTTTGCGATGCTTGCCAATTTCGTGA CGGTGAGGAGCAATATCGGGACTTCGATACGGAAAAGGCGGCGCGTCCTGAACTGTATAACTTTGGGATGAAGGGAATGC GAACGGCCCTCGAAGCCGCCGCCCTTGCCAGAGCGGAAGCCAATGCCGGGGAGTTGTCGCCAGAAGATGAGAATTATCTT CAGGAGGTCGCAGATGGCGCTTGGGGAGATGATCCAAGAACGCGCGGCCTTGCTCGGGACAGGTTAGCAGCCCACCCCGC CCCGCAGCCGAGCGGGCCGGTGGAGGCGCTGGACGATCTAACGCGCGACGAGATCAGCAGCCTGGCAAAGCGCCTGTGCC CAGATTGCGGTCGAGAGAAAGCAATGTCTGCGGCGGATGCCGCCAGGGGGCAGTGCCCTAAATGGTGGGCCATCACAGAC GCCGACGCAGAAAAGGATTGCCGAAATCACGTCCCGCAGCCGAGCAGGCCGACGCGGGAGCTTATAGAAGCTGGCCTGCT TCGCGGCGATGAGTCCTGCGAGTGCGGGGAATGCACCGTAGAAGAATGCAACGACTGCATGATGCCCGATGCAGCCCCGC AGCCGAGCGGGCCGGTGGAGGTCAAGCCCCTGGAGTGGCGCGAACGCTGGTATGGTTCGGAACCGATGCGGGGGTGGAGC ATCGTTCAAGACCGCGAACTTGTCGCTTACCTGGGTCCTGAAGTTGACGGCAAGCAGGTTACGGCAATCGTACTTGCGCA CAACGAGGCTATCTCCGCCCTCACGGCAGGCAAGCCGGTCGAAGCGGTCTTCGCGGAATTTGCCAAGAAGCAGGAGCGTC TACGCCATGATTTCGAAGCGGCAATCTTCGACAACCTCGAAGAGCTTTATGAGGGCGAGCCGATCCCGGCAGGCAAGCCG GAGCAGGAGATGCCGAGCGGGTGGCAACCGATGGAGACCGCGCCGAAGGACGGAACACCTGTGTTGCTTTCCTGGGGCCT AGGATACCATCCATTATCGGGCCGCTTTGAATACGGCAAATGGGGATTTTTAGGCTTCGACTGGGGATTCAACCCCTTCC CAACGCAACCGCGATACTGGTTGCCGCTCGACACTCTCCCCGCCGCCCCTACGGCAGGAGGTGGCGATGCGTAG
Upstream 100 bases:
>100_bases AGAAAAAGTCGGCGCGGCCAATCCCAGGATCCAAATCCACCAGGTTCAAGAAGCTCATCACCGGCGAGGTCGTAGACCGT CGGACAGGCGAGGTAATTTC
Downstream 100 bases:
>100_bases GCTGACGGAAGCGCAGATGCGCGCGCTCAAGGCGATGCCTTTTGATTACATGGAGTGGGGATTGGATCTACTCGGCCCGC TACCTGAGGCGGTTAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTSNSEISEKEVEAAFRAFCDACQFRDGEEQYRDFDTEKAARPELYNFGMKGMRTALEAAALARAEANAGELSPEDENYL QEVADGAWGDDPRTRGLARDRLAAHPAPQPSGPVEALDDLTRDEISSLAKRLCPDCGREKAMSAADAARGQCPKWWAITD ADAEKDCRNHVPQPSRPTRELIEAGLLRGDESCECGECTVEECNDCMMPDAAPQPSGPVEVKPLEWRERWYGSEPMRGWS IVQDRELVAYLGPEVDGKQVTAIVLAHNEAISALTAGKPVEAVFAEFAKKQERLRHDFEAAIFDNLEELYEGEPIPAGKP EQEMPSGWQPMETAPKDGTPVLLSWGLGYHPLSGRFEYGKWGFLGFDWGFNPFPTQPRYWLPLDTLPAAPTAGGGDA
Sequences:
>Translated_397_residues MTSNSEISEKEVEAAFRAFCDACQFRDGEEQYRDFDTEKAARPELYNFGMKGMRTALEAAALARAEANAGELSPEDENYL QEVADGAWGDDPRTRGLARDRLAAHPAPQPSGPVEALDDLTRDEISSLAKRLCPDCGREKAMSAADAARGQCPKWWAITD ADAEKDCRNHVPQPSRPTRELIEAGLLRGDESCECGECTVEECNDCMMPDAAPQPSGPVEVKPLEWRERWYGSEPMRGWS IVQDRELVAYLGPEVDGKQVTAIVLAHNEAISALTAGKPVEAVFAEFAKKQERLRHDFEAAIFDNLEELYEGEPIPAGKP EQEMPSGWQPMETAPKDGTPVLLSWGLGYHPLSGRFEYGKWGFLGFDWGFNPFPTQPRYWLPLDTLPAAPTAGGGDA >Mature_396_residues TSNSEISEKEVEAAFRAFCDACQFRDGEEQYRDFDTEKAARPELYNFGMKGMRTALEAAALARAEANAGELSPEDENYLQ EVADGAWGDDPRTRGLARDRLAAHPAPQPSGPVEALDDLTRDEISSLAKRLCPDCGREKAMSAADAARGQCPKWWAITDA DAEKDCRNHVPQPSRPTRELIEAGLLRGDESCECGECTVEECNDCMMPDAAPQPSGPVEVKPLEWRERWYGSEPMRGWSI VQDRELVAYLGPEVDGKQVTAIVLAHNEAISALTAGKPVEAVFAEFAKKQERLRHDFEAAIFDNLEELYEGEPIPAGKPE QEMPSGWQPMETAPKDGTPVLLSWGLGYHPLSGRFEYGKWGFLGFDWGFNPFPTQPRYWLPLDTLPAAPTAGGGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43812; Mature: 43681
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNSEISEKEVEAAFRAFCDACQFRDGEEQYRDFDTEKAARPELYNFGMKGMRTALEAA CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHH ALARAEANAGELSPEDENYLQEVADGAWGDDPRTRGLARDRLAAHPAPQPSGPVEALDDL HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHHHHHHCCCCCCCCCHHHHHHHH TRDEISSLAKRLCPDCGREKAMSAADAARGQCPKWWAITDADAEKDCRNHVPQPSRPTRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHH LIEAGLLRGDESCECGECTVEECNDCMMPDAAPQPSGPVEVKPLEWRERWYGSEPMRGWS HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCC IVQDRELVAYLGPEVDGKQVTAIVLAHNEAISALTAGKPVEAVFAEFAKKQERLRHDFEA HHHHCHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AIFDNLEELYEGEPIPAGKPEQEMPSGWQPMETAPKDGTPVLLSWGLGYHPLSGRFEYGK HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC WGFLGFDWGFNPFPTQPRYWLPLDTLPAAPTAGGGDA EEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TSNSEISEKEVEAAFRAFCDACQFRDGEEQYRDFDTEKAARPELYNFGMKGMRTALEAA CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHH ALARAEANAGELSPEDENYLQEVADGAWGDDPRTRGLARDRLAAHPAPQPSGPVEALDDL HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHHHHHHCCCCCCCCCHHHHHHHH TRDEISSLAKRLCPDCGREKAMSAADAARGQCPKWWAITDADAEKDCRNHVPQPSRPTRE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHH LIEAGLLRGDESCECGECTVEECNDCMMPDAAPQPSGPVEVKPLEWRERWYGSEPMRGWS HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCC IVQDRELVAYLGPEVDGKQVTAIVLAHNEAISALTAGKPVEAVFAEFAKKQERLRHDFEA HHHHCHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AIFDNLEELYEGEPIPAGKPEQEMPSGWQPMETAPKDGTPVLLSWGLGYHPLSGRFEYGK HHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC WGFLGFDWGFNPFPTQPRYWLPLDTLPAAPTAGGGDA EEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA