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The map label for this gene is ycaQ [H]

Identifier: 110633375

GI number: 110633375

Start: 1121882

End: 1123210

Strand: Reverse

Name: ycaQ [H]

Synonym: Meso_1021

Alternate gene names: 110633375

Gene position: 1123210-1121882 (Counterclockwise)

Preceding gene: 110633397

Following gene: 110633373

Centisome position: 25.46

GC content: 64.64

Gene sequence:

>1329_bases
ATGCGGGTGGCGCGCGGCGCATTCAGGCTCTACCTTTCGCACGCCAATGTGAAATCCCGAGGCCAGATGAAGCCACGTGA
AAAGTTGACGATAAGGGAGGTGCGGCGAATCGCCCTTTCCGCTCAGGGCTTCGCGGACCGGCCGCCGTCCGGCCCTATCG
GACGCCGGCATCTCTCCCGCGTGATAGGCCGCACCGGTCTCTTTCAGATCGACTCCGTCAATGTGGTCGTACGCGCGCAT
TATATGCCGCTCTTTTCCCGTCTCGGCCCCTATCCCGTCGAGCTTCTCGAGCGTGCCGCCTCGCGAAAGCCGCGCTCCCT
CTTTGAATATTGGGCGCACGAAGCCTCGCTCCTGCCCGTGGAGATTCAGCCGCTGATGCGGTGGCGCATGGAGCGCGCGC
GGGAGGGCCTGGGCATCTATGGCGGGCTTGCCCGGTTCGGCCGCGAGCAACGCAGCTTCATCGATCAGGTCTATGCCGAA
GTCGCCGCGCACGGCCCCCTTGCCGCTTCCGATATCGAGGGCCACAAGGGCACGTCCGGCTGGTGGCAATGGAGCGACGC
CAAGCGCGCGCTCGAATGGCTGTTCTGGGCCGGCTTCATCACCACGCATTCGCGGCGGGCGAGTTTTGAGCGGCTTTACC
ATTTGCCGGAGCGCGTCCTGCCACCGGCGATCCACGAAGCGCCCACACCTGCGCCTCAGGATGCAAAGCGAAAGCTGATC
GAGATTTCCGCCCGTGCGCTGGGCGTCGCGACCGCGAGCGATCTGCGGGACTATTTTCGCTTGTCACCGGAAGATGCCTA
TCCGCGCGTGGAGGAACTCGTCGAGGAAGGCACGCTCCTGCCCGTGAGCGTAAAGGGCTGGCCGCAGAAAGCGTATATGC
ACCGCGACGCGAAAATGCCGCGCAGGATCGAGGCAGGGGCACTGCTCGCGCCCTTCGATCCGCTGATCTGGGAGCGCTCG
CGCACCGAGCGCCTTTTCAACTTCCGCTACCGTATCGAGATTTACACGCCCGCGCACAAGCGCGTCTACGGATACTATGT
CTATCCCCTCCTGCTCGGCGAAAGCATCGTCGCGCGCGTCGATCTCAAGGCCGACCGTCAAAACCGCGTTCTGCGCGTGC
AGGCGGCGCATGCGGAGCCCGACGCGCCGCGCCACACCGCGCCGGAACTATGGCAGGCGCTCAATTCCATGGCGGAATGG
CTCGGATTGGAGAAGGTGGAGATTTCCCGCACCGGAGATTTTGCCCCGGCACTGGCCGCCGCCGGCAAAGTTGGCCTTAT
CGAGTCGAGCCAAGTGGCCGAGGCTGCCCTCACCGAGCCGCAGGAGTAA

Upstream 100 bases:

>100_bases
GGCGTGATGACAGCTATCATTTAAGAAGGCCGAGGCTTCTTTTGAAGCACCGATTTCGCTACCGCGACAAAAATGTCAGG
AGCCCGCGCCATGATCGTCA

Downstream 100 bases:

>100_bases
CCGGCGCGTTCGCTTCACCGGCCCCTCTCTTGCAAATTCCAAGAACTTAGCTTTGCTAAGCCCAGGAATTTGCTTTCTCT
CCCACAAGGGGAGAGATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MRVARGAFRLYLSHANVKSRGQMKPREKLTIREVRRIALSAQGFADRPPSGPIGRRHLSRVIGRTGLFQIDSVNVVVRAH
YMPLFSRLGPYPVELLERAASRKPRSLFEYWAHEASLLPVEIQPLMRWRMERAREGLGIYGGLARFGREQRSFIDQVYAE
VAAHGPLAASDIEGHKGTSGWWQWSDAKRALEWLFWAGFITTHSRRASFERLYHLPERVLPPAIHEAPTPAPQDAKRKLI
EISARALGVATASDLRDYFRLSPEDAYPRVEELVEEGTLLPVSVKGWPQKAYMHRDAKMPRRIEAGALLAPFDPLIWERS
RTERLFNFRYRIEIYTPAHKRVYGYYVYPLLLGESIVARVDLKADRQNRVLRVQAAHAEPDAPRHTAPELWQALNSMAEW
LGLEKVEISRTGDFAPALAAAGKVGLIESSQVAEAALTEPQE

Sequences:

>Translated_442_residues
MRVARGAFRLYLSHANVKSRGQMKPREKLTIREVRRIALSAQGFADRPPSGPIGRRHLSRVIGRTGLFQIDSVNVVVRAH
YMPLFSRLGPYPVELLERAASRKPRSLFEYWAHEASLLPVEIQPLMRWRMERAREGLGIYGGLARFGREQRSFIDQVYAE
VAAHGPLAASDIEGHKGTSGWWQWSDAKRALEWLFWAGFITTHSRRASFERLYHLPERVLPPAIHEAPTPAPQDAKRKLI
EISARALGVATASDLRDYFRLSPEDAYPRVEELVEEGTLLPVSVKGWPQKAYMHRDAKMPRRIEAGALLAPFDPLIWERS
RTERLFNFRYRIEIYTPAHKRVYGYYVYPLLLGESIVARVDLKADRQNRVLRVQAAHAEPDAPRHTAPELWQALNSMAEW
LGLEKVEISRTGDFAPALAAAGKVGLIESSQVAEAALTEPQE
>Mature_442_residues
MRVARGAFRLYLSHANVKSRGQMKPREKLTIREVRRIALSAQGFADRPPSGPIGRRHLSRVIGRTGLFQIDSVNVVVRAH
YMPLFSRLGPYPVELLERAASRKPRSLFEYWAHEASLLPVEIQPLMRWRMERAREGLGIYGGLARFGREQRSFIDQVYAE
VAAHGPLAASDIEGHKGTSGWWQWSDAKRALEWLFWAGFITTHSRRASFERLYHLPERVLPPAIHEAPTPAPQDAKRKLI
EISARALGVATASDLRDYFRLSPEDAYPRVEELVEEGTLLPVSVKGWPQKAYMHRDAKMPRRIEAGALLAPFDPLIWERS
RTERLFNFRYRIEIYTPAHKRVYGYYVYPLLLGESIVARVDLKADRQNRVLRVQAAHAEPDAPRHTAPELWQALNSMAEW
LGLEKVEISRTGDFAPALAAAGKVGLIESSQVAEAALTEPQE

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=396, Percent_Identity=35.8585858585859, Blast_Score=201, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 50245; Mature: 50245

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVARGAFRLYLSHANVKSRGQMKPREKLTIREVRRIALSAQGFADRPPSGPIGRRHLSR
CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VIGRTGLFQIDSVNVVVRAHYMPLFSRLGPYPVELLERAASRKPRSLFEYWAHEASLLPV
HHCCCCCEEECCCEEEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
EIQPLMRWRMERAREGLGIYGGLARFGREQRSFIDQVYAEVAAHGPLAASDIEGHKGTSG
EHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WWQWSDAKRALEWLFWAGFITTHSRRASFERLYHLPERVLPPAIHEAPTPAPQDAKRKLI
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCHHHHHHHH
EISARALGVATASDLRDYFRLSPEDAYPRVEELVEEGTLLPVSVKGWPQKAYMHRDAKMP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCC
RRIEAGALLAPFDPLIWERSRTERLFNFRYRIEIYTPAHKRVYGYYVYPLLLGESIVARV
CCCCCCCEECCCCHHHHCCHHHHHHHEEEEEEEEECCCCCCEEHEEHHHHHHCCHHHEEE
DLKADRQNRVLRVQAAHAEPDAPRHTAPELWQALNSMAEWLGLEKVEISRTGDFAPALAA
ECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
AGKVGLIESSQVAEAALTEPQE
CCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRVARGAFRLYLSHANVKSRGQMKPREKLTIREVRRIALSAQGFADRPPSGPIGRRHLSR
CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VIGRTGLFQIDSVNVVVRAHYMPLFSRLGPYPVELLERAASRKPRSLFEYWAHEASLLPV
HHCCCCCEEECCCEEEEEHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
EIQPLMRWRMERAREGLGIYGGLARFGREQRSFIDQVYAEVAAHGPLAASDIEGHKGTSG
EHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WWQWSDAKRALEWLFWAGFITTHSRRASFERLYHLPERVLPPAIHEAPTPAPQDAKRKLI
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHCCCCCCCHHHHHHHH
EISARALGVATASDLRDYFRLSPEDAYPRVEELVEEGTLLPVSVKGWPQKAYMHRDAKMP
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCC
RRIEAGALLAPFDPLIWERSRTERLFNFRYRIEIYTPAHKRVYGYYVYPLLLGESIVARV
CCCCCCCEECCCCHHHHCCHHHHHHHEEEEEEEEECCCCCCEEHEEHHHHHHCCHHHEEE
DLKADRQNRVLRVQAAHAEPDAPRHTAPELWQALNSMAEWLGLEKVEISRTGDFAPALAA
ECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
AGKVGLIESSQVAEAALTEPQE
CCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]