| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633327
Identifier: 110633327
GI number: 110633327
Start: 1069313
End: 1070377
Strand: Reverse
Name: 110633327
Synonym: Meso_0973
Alternate gene names: NA
Gene position: 1070377-1069313 (Counterclockwise)
Preceding gene: 110633331
Following gene: 110633325
Centisome position: 24.26
GC content: 54.84
Gene sequence:
>1065_bases ATGTTGTCTTTTGCCTCAAATTCGAACGAACAATACATGAAAATACGATCCTTAGTATTTCAACCCATACTGCTTCTTTG CGCTTTCATGATTGCCTTCCCGGCGTCGGCAAATGACAGCACCGCCGTGCTCGGCGCCGGCGGATTGGAGATCACTACAT CCGACGATATCGTCATGGAGGAAGAGAAGCTCTTCCTGTCGCCAGAGGAAATCCGTGTTCGCTACGTTTTCCGAAACGAT ACAGACAAGGACGTTACGACGCGTGTTGCCTTCCCGCTACCCATCGTTTCCTTTGGTCCCGCTGACAATTTTGAACTGCC GGATTCCCAGGACGAGAACTTCGTCGGCTTTACTGTAACGGTCGATGGCCAGCGCCTGGCGCCGGCGCTCGAGCAGCGAG CCGTCCTGGATAACGGCACCGATGTCACGGCGGCTGTGCGAGCGATTGGCCTGCCGCTTAACGCGTATCTTCCCTCCTGG GAAGAGAAGATCAAAGCCGTGCCGCGCGAGGCTTTAAGACGGCTCGTGGAACAGGGCGTTCTCGAACAGCTTAGCGATAC GGTTGAAACGGCCGATGACGTTTCCCCGTCCTGGAATCTGCACGCGACCTTTCATTGGGAGCAGACCTTCCCGGCTCAAA AGGCAGTCGTGGTGGAACATCAATACCAGCCGGTCGTCGGCTCTTCATTCTTTGTCGGGGACGATGGCGAATTGGATCGG CTATCGGAGGAATATGGGACGTCATATTGTCTGGACGACACGACAAAGGCTGGAGTGCGGCGCCTCCTCCAAAGCGCGGC AAAGGCCAACTCAAACGGCGATTATAAGTCTTACGTGTTCGCCTATGAGGTGAGCTACATCCTAAAGACCGGAGCAAACT GGAAGGGGCCGATCGGTCATTTCGAGTTGACGATCGACAAGATCAGGCCCGACGCGATCCTCTCGCTTTGCATAGACGGG GTCAGGAAAACGGGAACAACAACGTTCAAGGTCGAGCGGGACAACTTCACACCGACAAGGGACATCGGCTTTGTCGTGTT CGATCAGCGAGAACTCGTTGAATAA
Upstream 100 bases:
>100_bases GATCGCACGCTTGCCTCTCAACTTGTTACGAATGTTCACTTGGCTTACACCGCCGATGGTTTTACAATCTGATTAGGACA GTTATCGTCATGTAAAATGA
Downstream 100 bases:
>100_bases TCCCTTTGCTCCTCGGCACCGGCAGCATCCATATCCGCCCGCTCCCCCTCCCGCGTCTGATTGGGGACGGTGAAAACCTG GCCGGGCCAAATCCGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLSFASNSNEQYMKIRSLVFQPILLLCAFMIAFPASANDSTAVLGAGGLEITTSDDIVMEEEKLFLSPEEIRVRYVFRND TDKDVTTRVAFPLPIVSFGPADNFELPDSQDENFVGFTVTVDGQRLAPALEQRAVLDNGTDVTAAVRAIGLPLNAYLPSW EEKIKAVPREALRRLVEQGVLEQLSDTVETADDVSPSWNLHATFHWEQTFPAQKAVVVEHQYQPVVGSSFFVGDDGELDR LSEEYGTSYCLDDTTKAGVRRLLQSAAKANSNGDYKSYVFAYEVSYILKTGANWKGPIGHFELTIDKIRPDAILSLCIDG VRKTGTTTFKVERDNFTPTRDIGFVVFDQRELVE
Sequences:
>Translated_354_residues MLSFASNSNEQYMKIRSLVFQPILLLCAFMIAFPASANDSTAVLGAGGLEITTSDDIVMEEEKLFLSPEEIRVRYVFRND TDKDVTTRVAFPLPIVSFGPADNFELPDSQDENFVGFTVTVDGQRLAPALEQRAVLDNGTDVTAAVRAIGLPLNAYLPSW EEKIKAVPREALRRLVEQGVLEQLSDTVETADDVSPSWNLHATFHWEQTFPAQKAVVVEHQYQPVVGSSFFVGDDGELDR LSEEYGTSYCLDDTTKAGVRRLLQSAAKANSNGDYKSYVFAYEVSYILKTGANWKGPIGHFELTIDKIRPDAILSLCIDG VRKTGTTTFKVERDNFTPTRDIGFVVFDQRELVE >Mature_354_residues MLSFASNSNEQYMKIRSLVFQPILLLCAFMIAFPASANDSTAVLGAGGLEITTSDDIVMEEEKLFLSPEEIRVRYVFRND TDKDVTTRVAFPLPIVSFGPADNFELPDSQDENFVGFTVTVDGQRLAPALEQRAVLDNGTDVTAAVRAIGLPLNAYLPSW EEKIKAVPREALRRLVEQGVLEQLSDTVETADDVSPSWNLHATFHWEQTFPAQKAVVVEHQYQPVVGSSFFVGDDGELDR LSEEYGTSYCLDDTTKAGVRRLLQSAAKANSNGDYKSYVFAYEVSYILKTGANWKGPIGHFELTIDKIRPDAILSLCIDG VRKTGTTTFKVERDNFTPTRDIGFVVFDQRELVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39388; Mature: 39388
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFASNSNEQYMKIRSLVFQPILLLCAFMIAFPASANDSTAVLGAGGLEITTSDDIVME CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCEEEE EEKLFLSPEEIRVRYVFRNDTDKDVTTRVAFPLPIVSFGPADNFELPDSQDENFVGFTVT CCHHEECCCCEEEEEEEECCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEE VDGQRLAPALEQRAVLDNGTDVTAAVRAIGLPLNAYLPSWEEKIKAVPREALRRLVEQGV ECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH LEQLSDTVETADDVSPSWNLHATFHWEQTFPAQKAVVVEHQYQPVVGSSFFVGDDGELDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHH LSEEYGTSYCLDDTTKAGVRRLLQSAAKANSNGDYKSYVFAYEVSYILKTGANWKGPIGH HHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEEHHHCCCCCCCCCCE FELTIDKIRPDAILSLCIDGVRKTGTTTFKVERDNFTPTRDIGFVVFDQRELVE EEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHHCC >Mature Secondary Structure MLSFASNSNEQYMKIRSLVFQPILLLCAFMIAFPASANDSTAVLGAGGLEITTSDDIVME CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCEEEE EEKLFLSPEEIRVRYVFRNDTDKDVTTRVAFPLPIVSFGPADNFELPDSQDENFVGFTVT CCHHEECCCCEEEEEEEECCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEEEE VDGQRLAPALEQRAVLDNGTDVTAAVRAIGLPLNAYLPSWEEKIKAVPREALRRLVEQGV ECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH LEQLSDTVETADDVSPSWNLHATFHWEQTFPAQKAVVVEHQYQPVVGSSFFVGDDGELDR HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHH LSEEYGTSYCLDDTTKAGVRRLLQSAAKANSNGDYKSYVFAYEVSYILKTGANWKGPIGH HHHHHCCEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEEEHHHCCCCCCCCCCE FELTIDKIRPDAILSLCIDGVRKTGTTTFKVERDNFTPTRDIGFVVFDQRELVE EEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA