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The map label for this gene is fas6 [H]

Identifier: 110633325

GI number: 110633325

Start: 1066934

End: 1067533

Strand: Reverse

Name: fas6 [H]

Synonym: Meso_0971

Alternate gene names: 110633325

Gene position: 1067533-1066934 (Counterclockwise)

Preceding gene: 110633327

Following gene: 110633317

Centisome position: 24.19

GC content: 60.17

Gene sequence:

>600_bases
ATGAAAGCGATCACATCCGTTTGCGTCTACTGCGGCTCTTCCACGGGCCGCGGCGACGGCTATCTCACCGCCGGCCGAAG
GCTCGGCAATGCGCTTGCGCAAGCAGGCATCCGTCTCGTTTATGGCGGAGGAACCAAAGGCATCATGGGGGCGGTCGCCG
CCGGGTGCCTGGAAAAGGGAGGCAAGGTCACGGGCATCATTCCGCGCTTCCTGATAAAATGGGAAGCGACCGAAAACGCG
CATACCAGCCTCGACGACCTCATCGTCACCGAGGACATGCACCAGCGCAAGCATCTGATGTTCGACCATTCCGACGCCTT
CATCGCACTTCCGGGCGGCATCGGGACGGTGGAGGAGATCGTCGAGATCATGACCTGGGCCCAACTCGGCCGGCACGAGA
AACCCATCGTTTTCGCCAATATCGACGGCTTCTGGGCGCCTCTTATGTCGCTTCTGGAACATATGAGAGCGGAAGGCTTC
ATCCATACCGGACACCGCGTGAAACCGCTCGTCATCGATCACGTGGACGAAATCGTGCCGGCACTTATGGGCACCGGCTC
CCCTTCCGAGGGTGACCCCGCGATTATTGAACGGCTTTGA

Upstream 100 bases:

>100_bases
AGGTCCCTTGAAGTCCCGGCATTCACCCGGCTTTGTTGCTCCCTCGACAGATGACAATAGTCACTTGACCCGGCTCGCCA
AGCCAATCACCAATGCTCAC

Downstream 100 bases:

>100_bases
CCTTTGCCCCACGGAGCATCGGCCAGGTGTAAAGCGCCAGCGCGATCCAGATGAGGGCGAAGGTGAAGGCCTGGACGCGG
CTGAAAGGCTCCTTGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKAITSVCVYCGSSTGRGDGYLTAGRRLGNALAQAGIRLVYGGGTKGIMGAVAAGCLEKGGKVTGIIPRFLIKWEATENA
HTSLDDLIVTEDMHQRKHLMFDHSDAFIALPGGIGTVEEIVEIMTWAQLGRHEKPIVFANIDGFWAPLMSLLEHMRAEGF
IHTGHRVKPLVIDHVDEIVPALMGTGSPSEGDPAIIERL

Sequences:

>Translated_199_residues
MKAITSVCVYCGSSTGRGDGYLTAGRRLGNALAQAGIRLVYGGGTKGIMGAVAAGCLEKGGKVTGIIPRFLIKWEATENA
HTSLDDLIVTEDMHQRKHLMFDHSDAFIALPGGIGTVEEIVEIMTWAQLGRHEKPIVFANIDGFWAPLMSLLEHMRAEGF
IHTGHRVKPLVIDHVDEIVPALMGTGSPSEGDPAIIERL
>Mature_199_residues
MKAITSVCVYCGSSTGRGDGYLTAGRRLGNALAQAGIRLVYGGGTKGIMGAVAAGCLEKGGKVTGIIPRFLIKWEATENA
HTSLDDLIVTEDMHQRKHLMFDHSDAFIALPGGIGTVEEIVEIMTWAQLGRHEKPIVFANIDGFWAPLMSLLEHMRAEGF
IHTGHRVKPLVIDHVDEIVPALMGTGSPSEGDPAIIERL

Specific function: The FAS-operon encodes genes involved in cytokinin production and in host plant fasciation (leafy gall) [H]

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=179, Percent_Identity=41.340782122905, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21385; Mature: 21385

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAITSVCVYCGSSTGRGDGYLTAGRRLGNALAQAGIRLVYGGGTKGIMGAVAAGCLEKG
CHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCC
GKVTGIIPRFLIKWEATENAHTSLDDLIVTEDMHQRKHLMFDHSDAFIALPGGIGTVEEI
CCEEEECHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHH
VEIMTWAQLGRHEKPIVFANIDGFWAPLMSLLEHMRAEGFIHTGHRVKPLVIDHVDEIVP
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
ALMGTGSPSEGDPAIIERL
HHHCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKAITSVCVYCGSSTGRGDGYLTAGRRLGNALAQAGIRLVYGGGTKGIMGAVAAGCLEKG
CHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCC
GKVTGIIPRFLIKWEATENAHTSLDDLIVTEDMHQRKHLMFDHSDAFIALPGGIGTVEEI
CCEEEECHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHH
VEIMTWAQLGRHEKPIVFANIDGFWAPLMSLLEHMRAEGFIHTGHRVKPLVIDHVDEIVP
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHH
ALMGTGSPSEGDPAIIERL
HHHCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8169198 [H]