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The map label for this gene is ybfB [H]

Identifier: 110633307

GI number: 110633307

Start: 1049763

End: 1051001

Strand: Direct

Name: ybfB [H]

Synonym: Meso_0953

Alternate gene names: 110633307

Gene position: 1049763-1051001 (Clockwise)

Preceding gene: 110633306

Following gene: 110633308

Centisome position: 23.79

GC content: 63.28

Gene sequence:

>1239_bases
ATGACCAAGACCGTTTCGACCCGCGCCGCTTCCCCATCCTTTCCGTGGCTGATCGTGATCTGCGGCTGTCTTATCGCTGC
GCTCACCTTCGGCCCGCGCTCGGCCATGGGTTTCTTCCAGCTTCCCATGCTCGCGGAAAAGGGCTGGGACCGCACGACCT
TTGCGCTCGCCATGGCGATCCAGAACCTGCTCTGGGGCGCCGGCCAGCCATTCTTCGGCGCGATTGCCGACCGTTTCGGC
ACCTGGCGGGTGCTCGCCATGTCCGGCATTCTCTACGCGCTTGGGCTTTTCCTGATGGCCACCGCCGACAGCCCGGCGAT
ACTGCACATCGGCGGCGGCGCTCTGGTTGGCCTCGGCGTTGCGGCAGGCTCCTTCGGCATCGTTCTGTCAGCCTTCGCGC
GCAACGTGCCTTCGGAAAAGCGCAGCCTGGTCTTCGGCATCGGAACGGCGGCGGGCTCGGCGGGCATGTTCCTCTTCGCT
CCCATCAGCCAAGGCATGATCGACAGTTTCGGCTGGTCTGACACGCTCGTCTATATGAGCATCGCCATGCTCATCGTGCC
GGTGCTCGCCATTCCGCTGGCCGGCAATTCGTCGAGCGGCGTGGCGCGCCAGGCCGAATATGAGCAGACTTTCGGCGCGG
CGCTGCGCGAGGCCTTCGCCCATCGCGGCTTCGTCCTGTTGAACTCCGGTTTCTTCGTCTGCGGTTTTCAGGTCGCCTTC
ATCACGGCGCACTTTCCCGCCTATCTCGGGGATATCGGCATCGATGCCAGCTATGCGGTGATCGCGCTCGCGCTCATCGG
TTTCTGCAACATCATCGGTTCGCTCGCTTCAGGCTTTATTGGCCAGCGCTATCCGAAGCCGGCCTTTCTGGCCTTCATTT
ATCTCGCACGCTCCGTCCTTGTGACCGCATTCCTCCTCCTGCCGCAAACTCCCATCACGGTGGTGATCTTCGCGATTTTG
ATGGGGTTCCTGTGGCTTTCGACCGTACCGCCCACCAATGCGCTCGTGGCCGTGATGTTCGGCACACGCCATCTCGGCAT
GCTCGGCGGCGTGGTCTTCTTCTCGCACCAGATCGGATCGTTCCTCGGCGTTTGGCTCGGCGGCTATCTCTATGATCGGT
TCGGCTCGTATGACCCGGTGTGGTGGCTGGGCGTCGCACTCGGAATTTTCGCCGCCATCGTCCATTGGCCGATCCAGGAA
AAGCCGGTGGAGAGGCCCGCGCTCGCCGCGGCGGGGTGA

Upstream 100 bases:

>100_bases
GAGTAAGCATCAAAAATATTGAAACTACAGTGCTCATCTATTCATTTGAATCAATGATTGCTTTGGCTAAGTCTATGGCT
ACGCAATCAAGGGCACTCCC

Downstream 100 bases:

>100_bases
AGTTGTCGCCGGCGCCAAGATTCTGTCATCTGGCTGCAACACGGGTTTGCTTTAGCCCTTCTGGAGACTTCCCACCCACC
AGGAGGCAGGCATGAACCAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTKTVSTRAASPSFPWLIVICGCLIAALTFGPRSAMGFFQLPMLAEKGWDRTTFALAMAIQNLLWGAGQPFFGAIADRFG
TWRVLAMSGILYALGLFLMATADSPAILHIGGGALVGLGVAAGSFGIVLSAFARNVPSEKRSLVFGIGTAAGSAGMFLFA
PISQGMIDSFGWSDTLVYMSIAMLIVPVLAIPLAGNSSSGVARQAEYEQTFGAALREAFAHRGFVLLNSGFFVCGFQVAF
ITAHFPAYLGDIGIDASYAVIALALIGFCNIIGSLASGFIGQRYPKPAFLAFIYLARSVLVTAFLLLPQTPITVVIFAIL
MGFLWLSTVPPTNALVAVMFGTRHLGMLGGVVFFSHQIGSFLGVWLGGYLYDRFGSYDPVWWLGVALGIFAAIVHWPIQE
KPVERPALAAAG

Sequences:

>Translated_412_residues
MTKTVSTRAASPSFPWLIVICGCLIAALTFGPRSAMGFFQLPMLAEKGWDRTTFALAMAIQNLLWGAGQPFFGAIADRFG
TWRVLAMSGILYALGLFLMATADSPAILHIGGGALVGLGVAAGSFGIVLSAFARNVPSEKRSLVFGIGTAAGSAGMFLFA
PISQGMIDSFGWSDTLVYMSIAMLIVPVLAIPLAGNSSSGVARQAEYEQTFGAALREAFAHRGFVLLNSGFFVCGFQVAF
ITAHFPAYLGDIGIDASYAVIALALIGFCNIIGSLASGFIGQRYPKPAFLAFIYLARSVLVTAFLLLPQTPITVVIFAIL
MGFLWLSTVPPTNALVAVMFGTRHLGMLGGVVFFSHQIGSFLGVWLGGYLYDRFGSYDPVWWLGVALGIFAAIVHWPIQE
KPVERPALAAAG
>Mature_411_residues
TKTVSTRAASPSFPWLIVICGCLIAALTFGPRSAMGFFQLPMLAEKGWDRTTFALAMAIQNLLWGAGQPFFGAIADRFGT
WRVLAMSGILYALGLFLMATADSPAILHIGGGALVGLGVAAGSFGIVLSAFARNVPSEKRSLVFGIGTAAGSAGMFLFAP
ISQGMIDSFGWSDTLVYMSIAMLIVPVLAIPLAGNSSSGVARQAEYEQTFGAALREAFAHRGFVLLNSGFFVCGFQVAFI
TAHFPAYLGDIGIDASYAVIALALIGFCNIIGSLASGFIGQRYPKPAFLAFIYLARSVLVTAFLLLPQTPITVVIFAILM
GFLWLSTVPPTNALVAVMFGTRHLGMLGGVVFFSHQIGSFLGVWLGGYLYDRFGSYDPVWWLGVALGIFAAIVHWPIQEK
PVERPALAAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=376, Percent_Identity=26.8617021276596, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1789969, Length=305, Percent_Identity=28.1967213114754, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43683; Mature: 43552

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTVSTRAASPSFPWLIVICGCLIAALTFGPRSAMGFFQLPMLAEKGWDRTTFALAMAI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
QNLLWGAGQPFFGAIADRFGTWRVLAMSGILYALGLFLMATADSPAILHIGGGALVGLGV
HHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
AAGSFGIVLSAFARNVPSEKRSLVFGIGTAAGSAGMFLFAPISQGMIDSFGWSDTLVYMS
HHHHHHHHHHHHHHCCCCCHHCEEEEEECCCCCCCEEEEECCCCCHHHHCCCCHHHHHHH
IAMLIVPVLAIPLAGNSSSGVARQAEYEQTFGAALREAFAHRGFVLLNSGFFVCGFQVAF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEHHHHHHH
ITAHFPAYLGDIGIDASYAVIALALIGFCNIIGSLASGFIGQRYPKPAFLAFIYLARSVL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VTAFLLLPQTPITVVIFAILMGFLWLSTVPPTNALVAVMFGTRHLGMLGGVVFFSHQIGS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEHHCCHHHHHHHHHHHHHHHHHH
FLGVWLGGYLYDRFGSYDPVWWLGVALGIFAAIVHWPIQEKPVERPALAAAG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TKTVSTRAASPSFPWLIVICGCLIAALTFGPRSAMGFFQLPMLAEKGWDRTTFALAMAI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
QNLLWGAGQPFFGAIADRFGTWRVLAMSGILYALGLFLMATADSPAILHIGGGALVGLGV
HHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
AAGSFGIVLSAFARNVPSEKRSLVFGIGTAAGSAGMFLFAPISQGMIDSFGWSDTLVYMS
HHHHHHHHHHHHHHCCCCCHHCEEEEEECCCCCCCEEEEECCCCCHHHHCCCCHHHHHHH
IAMLIVPVLAIPLAGNSSSGVARQAEYEQTFGAALREAFAHRGFVLLNSGFFVCGFQVAF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEHHHHHHH
ITAHFPAYLGDIGIDASYAVIALALIGFCNIIGSLASGFIGQRYPKPAFLAFIYLARSVL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VTAFLLLPQTPITVVIFAILMGFLWLSTVPPTNALVAVMFGTRHLGMLGGVVFFSHQIGS
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHEEEEHHCCHHHHHHHHHHHHHHHHHH
FLGVWLGGYLYDRFGSYDPVWWLGVALGIFAAIVHWPIQEKPVERPALAAAG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]