| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633280
Identifier: 110633280
GI number: 110633280
Start: 1024377
End: 1024769
Strand: Direct
Name: 110633280
Synonym: Meso_0926
Alternate gene names: NA
Gene position: 1024377-1024769 (Clockwise)
Preceding gene: 110633279
Following gene: 110633286
Centisome position: 23.22
GC content: 65.9
Gene sequence:
>393_bases ATGATCCGCACCATTCTTTCCGCCGCCGTGCTCGGCGCCTGCCTCGCCAGCGCTCCGGCCCATGCCGGCGGCTCCGTTTC GCTGAGCTACCAGCCCACCAATCCGCACGATGCCCATATGCTGCAGACGGGTCTGCGTCTTTATGCGCTCGCCGAAGGCA TCAAGAGCGGCCGCATCAAGCAGAAGGGTTTTGGCAACGCGGCCGGGCTGGCCCAGAACGGGCGCGGCAATCTCGGCATC GTGCATCAGGAGGGCAGGGGCCACGAAGGCACGGTCACGCAGAACGGCGACGGCAACGCCTACGGCCTGTTCCAGTTCGG CAGGGGCACCTCGGGCCATGTGGTGCAGAACGGCAATTATCAGTCCGGCGCCACCTTCCAGTACGGCTGGTAG
Upstream 100 bases:
>100_bases ACGGCAGGCTCACCTGCAGCAAACGCACCGGCTGAGCCGGCACGGCAAAAGCTTTTTTATCCGGCCAGGGGCCGCATCGC TTTTCAAAGGGAGACAAGTC
Downstream 100 bases:
>100_bases GAAAGGCCTTGGCGGGGGGAGAAAATGGCTCCGCTCCCGCAGAAAAGAAATATGGCGCGCTCCAGGCCTGGCCGCGCCAT CGCCATTCGCTCGGCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIRTILSAAVLGACLASAPAHAGGSVSLSYQPTNPHDAHMLQTGLRLYALAEGIKSGRIKQKGFGNAAGLAQNGRGNLGI VHQEGRGHEGTVTQNGDGNAYGLFQFGRGTSGHVVQNGNYQSGATFQYGW
Sequences:
>Translated_130_residues MIRTILSAAVLGACLASAPAHAGGSVSLSYQPTNPHDAHMLQTGLRLYALAEGIKSGRIKQKGFGNAAGLAQNGRGNLGI VHQEGRGHEGTVTQNGDGNAYGLFQFGRGTSGHVVQNGNYQSGATFQYGW >Mature_130_residues MIRTILSAAVLGACLASAPAHAGGSVSLSYQPTNPHDAHMLQTGLRLYALAEGIKSGRIKQKGFGNAAGLAQNGRGNLGI VHQEGRGHEGTVTQNGDGNAYGLFQFGRGTSGHVVQNGNYQSGATFQYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13467; Mature: 13467
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTILSAAVLGACLASAPAHAGGSVSLSYQPTNPHDAHMLQTGLRLYALAEGIKSGRIK CHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC QKGFGNAAGLAQNGRGNLGIVHQEGRGHEGTVTQNGDGNAYGLFQFGRGTSGHVVQNGNY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECCCC QSGATFQYGW CCCEEEECCC >Mature Secondary Structure MIRTILSAAVLGACLASAPAHAGGSVSLSYQPTNPHDAHMLQTGLRLYALAEGIKSGRIK CHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC QKGFGNAAGLAQNGRGNLGIVHQEGRGHEGTVTQNGDGNAYGLFQFGRGTSGHVVQNGNY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCEEEEEEECCCCCCCEEECCCC QSGATFQYGW CCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA