| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633274
Identifier: 110633274
GI number: 110633274
Start: 1019787
End: 1020395
Strand: Direct
Name: 110633274
Synonym: Meso_0920
Alternate gene names: NA
Gene position: 1019787-1020395 (Clockwise)
Preceding gene: 110633271
Following gene: 110633278
Centisome position: 23.11
GC content: 60.1
Gene sequence:
>609_bases ATGAAACTGGTGTGGCTGTTGGCGATCGCTTCTGTAAGTGCGCTTTCGCCGGCCATCGCGCGTGCGGACTGGAAGCCCGC CGAGAAGATCGTGACCTATCCCGTCTCCGGCAAGACCGGCATCGAGCTTTACCGCTCGATCGGGGAAAACGGGCCGAAGG TCGGCGTCGGCCGCGTGATCGCCTATACGGATTTTGATCTCAAATGGTCGCGCGACTACCAGCCGCGAAACGGCGGCTGC GTACTCGCCTCCGCAAAGCCCTTCCTCACCATCACTTACCGGCTGCCGAAGGTTTCAGGAAAGCTGCCGCCCGAAACGCA GCCGCTGTGGGAGGCCTTCATCGCAGGCGTGGAAAAGCACGAGCGGGTGCATGGCGAAATCATCCTCGACATGGTGAAGA AAATTGAGGCCGTGTCCGTCGGGCTCACGACCTCGGACGATCCCGCGTGCCAAAAAATCCGCGAAGTGCTGACGCAAAAG CTCGGCGAACTGTCACAGGAGCAGCGGCGCAGAAGCCGCGAGTTCGACAAGGTGGAAATGAGTGACGGCGGAAACGTGCA CCAGCTGGTGTTAAGGTTGGTGAATGGGCAAACGGAAATGTCGGAGTGA
Upstream 100 bases:
>100_bases GCGGCGAAAGCGCCGGCAGCGGCTCGACAGTGGGCAATTCCACTTGCGCACGAAATATTCTAAACGCTTGGCTTCCCCGG CGGAGCGGCGAGGTGCAGGA
Downstream 100 bases:
>100_bases CGCTGCTCCCATTGTTTGACAGTCTGCTTCAGCGCAAAAGAAAAAGCCGGCACATGCCGGCTGAATTTGCAATGAATTTA CTGCCATCAAGTCCGGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKLVWLLAIASVSALSPAIARADWKPAEKIVTYPVSGKTGIELYRSIGENGPKVGVGRVIAYTDFDLKWSRDYQPRNGGC VLASAKPFLTITYRLPKVSGKLPPETQPLWEAFIAGVEKHERVHGEIILDMVKKIEAVSVGLTTSDDPACQKIREVLTQK LGELSQEQRRRSREFDKVEMSDGGNVHQLVLRLVNGQTEMSE
Sequences:
>Translated_202_residues MKLVWLLAIASVSALSPAIARADWKPAEKIVTYPVSGKTGIELYRSIGENGPKVGVGRVIAYTDFDLKWSRDYQPRNGGC VLASAKPFLTITYRLPKVSGKLPPETQPLWEAFIAGVEKHERVHGEIILDMVKKIEAVSVGLTTSDDPACQKIREVLTQK LGELSQEQRRRSREFDKVEMSDGGNVHQLVLRLVNGQTEMSE >Mature_202_residues MKLVWLLAIASVSALSPAIARADWKPAEKIVTYPVSGKTGIELYRSIGENGPKVGVGRVIAYTDFDLKWSRDYQPRNGGC VLASAKPFLTITYRLPKVSGKLPPETQPLWEAFIAGVEKHERVHGEIILDMVKKIEAVSVGLTTSDDPACQKIREVLTQK LGELSQEQRRRSREFDKVEMSDGGNVHQLVLRLVNGQTEMSE
Specific function: Unknown
COG id: COG5664
COG function: function code O; Predicted secreted Zn-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22444; Mature: 22444
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVWLLAIASVSALSPAIARADWKPAEKIVTYPVSGKTGIELYRSIGENGPKVGVGRVI CHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCHHHHHHHHHCCCCCCCCCCEEE AYTDFDLKWSRDYQPRNGGCVLASAKPFLTITYRLPKVSGKLPPETQPLWEAFIAGVEKH EEECCCCEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ERVHGEIILDMVKKIEAVSVGLTTSDDPACQKIREVLTQKLGELSQEQRRRSREFDKVEM HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SDGGNVHQLVLRLVNGQTEMSE CCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLVWLLAIASVSALSPAIARADWKPAEKIVTYPVSGKTGIELYRSIGENGPKVGVGRVI CHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCHHHHHHHHHCCCCCCCCCCEEE AYTDFDLKWSRDYQPRNGGCVLASAKPFLTITYRLPKVSGKLPPETQPLWEAFIAGVEKH EEECCCCEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ERVHGEIILDMVKKIEAVSVGLTTSDDPACQKIREVLTQKLGELSQEQRRRSREFDKVEM HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SDGGNVHQLVLRLVNGQTEMSE CCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA